DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and Ldsdh1

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:XP_310845.5 Gene:Ldsdh1 / 1271983 VectorBaseID:AGAMI1_003297 Length:359 Species:Anopheles gambiae


Alignment Length:319 Identity:148/319 - (46%)
Similarity:216/319 - (67%) Gaps:11/319 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TTPASKR----------IFDVLKDVLQFFELYVRILLELFVSLVQIVLPKKQKDVSGEIVLITGT 63
            |:|||.|          :::::..::....:.||.:.....|..::|:|.....|..:||||||.
Mosquito    42 TSPASDRQTAAPNAGVKMYNLVILIIDIVAMLVRWIYHTLESFYRLVVPPAADTVHTDIVLITGA 106

  Fly    64 GHGIGRELALHYASLGSTVVCVDIDGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIK 128
            |||:||.:||.||.||:|||||||:.|.|..||... |...|..:.|.|||:.|.::...|.:|:
Mosquito   107 GHGMGRCMALQYAQLGATVVCVDINEKMNADTVATI-RQQRGNAFGYVCDVTNRQQIIETAQQIR 170

  Fly   129 SDVGCISVLVNNVGIMPTHPILQQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSI 193
            .:||.:::||||.|||||||:|||:..||::.|::||.:.||.:|::||.|.||.||:|:.|||:
Mosquito   171 QEVGTVTILVNNAGIMPTHPLLQQTEPEIRKTFEINVMAHFWLLQSYLPGMLEKNRGYIVAMSSV 235

  Fly   194 AGLVGISNLVPYCATKFAVRGLMEALHAELRQGPFRDLIRTTTIFPYMTNTGLCKHPKVKFPSIL 258
            |||.|::||||||.:||||||:||||..||||...:..|:.||::|||.:|||||.|.::||:::
Mosquito   236 AGLCGLNNLVPYCGSKFAVRGIMEALAEELRQDARKPNIKFTTVYPYMVDTGLCKRPHMRFPNLM 300

  Fly   259 GLLDPKQVAKRIVEAHRTDLMEVTIPSCLLYINNWTRLLPDHCGLMLKDFIDSGVESDL 317
            .|:.|::.|..|::..|..|::|:||..|||:|...|:.|...|.:|:||:||||||||
Mosquito   301 RLVKPEEAAAAIIDGQRRGLVDVSIPKYLLYLNTIIRVFPIKVGTLLRDFLDSGVESDL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 124/241 (51%)
Ldsdh1XP_310845.5 17beta-HSDXI-like_SDR_c 100..343 CDD:187598 125/243 (51%)

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