DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7-like and Tex48

DIOPT Version :9

Sequence 1:NP_001097151.1 Gene:RpL7-like / 34625 FlyBaseID:FBgn0032404 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001343254.1 Gene:Tex48 / 75524 MGIID:1922774 Length:110 Species:Mus musculus


Alignment Length:68 Identity:17/68 - (25%)
Similarity:29/68 - (42%) Gaps:18/68 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLPGK-----TVSVLKHRKRRILQD-------ESVVTQKRNDRIKKRTATKNHHKFRRAESFVMG 62
            |:|.:     |.:.||..|..:.:.       :|||.|:     |..||:.::.:. .|.:...|
Mouse    28 KVPSQESQTPTYNSLKTEKSELCEQNLKRATAQSVVGQE-----KHSTASSDYEEL-TAYNIQTG 86

  Fly    63 YLK 65
            |.|
Mouse    87 YPK 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7-likeNP_001097151.1 uL30_euk 18..257 CDD:273548 14/55 (25%)
Ribosomal_L7_archeal_euk 97..257 CDD:100099
Tex48NP_001343254.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1841
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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