DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7-like and rpl7

DIOPT Version :9

Sequence 1:NP_001097151.1 Gene:RpL7-like / 34625 FlyBaseID:FBgn0032404 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001005020.1 Gene:rpl7 / 448528 XenbaseID:XB-GENE-954734 Length:246 Species:Xenopus tropicalis


Alignment Length:255 Identity:89/255 - (34%)
Similarity:135/255 - (52%) Gaps:27/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTATKNHHK------FRRAESFVMGYLKAER 68
            |:|....|:||.||:        ....:..|:||..|.|...|      |:|||    ||.|..|
 Frog     8 KVPSVPESLLKRRKQ--------FAAAKLKRVKKIVAEKKLRKQKRKIIFKRAE----GYYKEYR 60

  Fly    69 TSKRIKQTILRTNVTEQSAKAAD---DSNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVF 130
            ...|.:..:.|     .:.||.:   .:.|||.||:|..|..........:.:.||:....|..|
 Frog    61 QMYRKEVRLAR-----MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTF 120

  Fly   131 MENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICL 195
            :...|.:..:||::||::.:|.|:|.|:|:|::|:|:.:|..::..:..|:::|:.||.|||:|:
 Frog   121 VRLNKASINMLRLVEPYIAWGYPNLKSVRQLIYKRGYLKIKNQRIPLTDNSLIEKHLGKKGVMCV 185

  Fly   196 EDIIHEICTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
            ||:|||:.|||.||.|.|.||..|.||||..|..|| :..:..||:.|:|...||.||.|
 Frog   186 EDLIHEVYTVGKNFKAANNFLWPFKLSSPRGGMNKK-TTHFVEGGDAGNREDQINRLIRR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7-likeNP_001097151.1 uL30_euk 18..257 CDD:273548 86/247 (35%)
Ribosomal_L7_archeal_euk 97..257 CDD:100099 62/159 (39%)
rpl7NP_001005020.1 uL30_euk 14..246 CDD:273548 87/249 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11524
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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