DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7-like and rlp7

DIOPT Version :9

Sequence 1:NP_001097151.1 Gene:RpL7-like / 34625 FlyBaseID:FBgn0032404 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_593454.1 Gene:rlp7 / 2543548 PomBaseID:SPAC664.06 Length:249 Species:Schizosaccharomyces pombe


Alignment Length:240 Identity:89/240 - (37%)
Similarity:135/240 - (56%) Gaps:18/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RKRRILQDESVVTQKRNDRIKKRTATKNHHK--FRRAESFVMGYLKAERTSKRIKQTILRTNVTE 84
            :||::  :|....::....|.|:.|.|.:.|  |:|||:|:..|.:.||...|:          .
pombe    20 KKRKV--NERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRL----------N 72

  Fly    85 QSAKAADD----SNPKLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIE 145
            :|||...|    ...|||||:|.||.|........:.|.||:...:||||:.|.|....:||::|
pombe    73 RSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVE 137

  Fly   146 PFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNFA 210
            |:|:||.|:|.|:|||::|:||.:|:|::.|:..|.::|:.||...||.:|||||||..||.:|.
pombe   138 PYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFK 202

  Fly   211 AVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
            .|.:||..|||:...:...:|....:..|.:.|..|..|||||.:
pombe   203 EVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7-likeNP_001097151.1 uL30_euk 18..257 CDD:273548 89/240 (37%)
Ribosomal_L7_archeal_euk 97..257 CDD:100099 67/159 (42%)
rlp7NP_593454.1 uL30_euk 16..249 CDD:273548 89/240 (37%)
Ribosomal_L30_N 18..86 CDD:285340 21/77 (27%)
Ribosomal_L7_archeal_euk 89..249 CDD:100099 67/159 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1841
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11524
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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