DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment JhI-21 and frlA

DIOPT Version :10

Sequence 1:NP_609542.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_417829.2 Gene:frlA / 947878 ECOCYCID:EG12908 Length:445 Species:Escherichia coli


Alignment Length:459 Identity:116/459 - (25%)
Similarity:204/459 - (44%) Gaps:51/459 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LKRKLTLINGVAIIVGTIIGSGIFIAPTGVFIYTESVGSSLLIWLT-----CGILSTIGALC-YA 95
            |:|||.....:||.|||.:|||||::...|   .::.|:.   |||     .|.|..|..:| ||
E. coli     6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEV---AKAAGTP---WLTVLAFVIGGLIVIPQMCVYA 64

  Fly    96 ELGTCITRSGGDYAYLLVSFGPLVGFLRLWIALLIIRPTTQTIVALSFAHYAVKPFFPECDPPQN 160
            ||.|....:|.||.||..:....:.||..|.:.......:.:|:||:..  :...|....||...
E. coli    65 ELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIV--SNLGFLTPIDPLLG 127

  Fly   161 AVKLLAAICLTLLTTINCLSVKVSMKVQDVFTVGKLLALIMIILSGLYYMATGELENFRNPWEGI 225
              |.:||..:.....::..||:.....|.:.|:.|::...::|..|:::.   :.|||..|....
E. coli   128 --KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF---KAENFAAPTTTA 187

  Fly   226 YTARNIGYAFYSGLFAFGGWNY-----LNFVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYF 285
            ..|.....|..:|:.| ..|:|     :.::|.|:::|.|.:|||:..:..||..:|.|:.|...
E. coli   188 IGATGSFMALLAGISA-TSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVIS 251

  Fly   286 AVVNKPEMLSS---LAVAVTFGNRVFGPLAFMVPIFVALST----FGGVNGVLFTSARLFATGAQ 343
            .::...::.:|   ::.|:|:    ...|.....||||::.    .|.::..:....||....|:
E. coli   252 GLMPFDKLANSETPISDALTW----IPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAK 312

  Fly   344 EGHLPKFFQLFHVKQQTPIPSLIFTCLMSLLMLLTDNVYQLINYFSSVLWLSVVASIAGMLWLRH 408
            :....|.|...|.|..||..|:|....:.:..:...::..|:.||:.|:......:...::|.| 
E. coli   313 DNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCR- 376

  Fly   409 KRPDLPRP--------IKVHLALPITFMVSCVTLVLLPNLEEPQNLLIGIGITLAGIPFYYAFIA 465
            ||.|. :|        :...||:..:.::...|.|..|    ...|:..:.:...|:| .|||.|
E. coli   377 KRDDY-KPLWRTPAFGLMTTLAIASSLILVASTFVWAP----IPGLICAVIVIATGLP-AYAFWA 435

  Fly   466 RKKK 469
            ::.:
E. coli   436 KRSR 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_609542.1 2A0308 27..494 CDD:273332 116/459 (25%)
frlANP_417829.2 frlA 1..445 CDD:183096 116/459 (25%)

Return to query results.
Submit another query.