DRSC/TRiP Functional Genomics Resources

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Protein Alignment JhI-21 and AGP3

DIOPT Version :9

Sequence 1:NP_001245996.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_116600.1 Gene:AGP3 / 850489 SGDID:S000001839 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:511 Identity:93/511 - (18%)
Similarity:187/511 - (36%) Gaps:141/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NPADGEEKIVLKRKLTLIN-GVAIIVGTIIGSGIFIAPTG--------------VFIYTESVGSS 76
            :|..|.::.:..|.::|:. |..|..|.::|:|..:...|              .|...||:|..
Yeast    44 DPQTGVKRALKNRHISLLALGGVIGPGCLVGAGNALNKGGPLALLLGFSIIGIIAFSVMESIGEM 108

  Fly    77 LLIWLTCGILSTIGALCYAEL--GTCITRSGGDYAYLLVSFG--------------------PLV 119
            :.::.:.|..:|:....:::.  ..|      .|||::|.|.                    ||.
Yeast   109 ITLYPSGGGFTTLARRFHSDALPAVC------GYAYVVVFFAVLANEYNTLSSILQFWGPQVPLY 167

  Fly   120 GFLRL-WIALLIIRPTTQTIVALSFAHYAVKPFFPECDPPQNAVKLLAAICLTLLTTINCLSVKV 183
            |::.: |.|..|.:     :|.:.        .|.|.:           ..|..|          
Yeast   168 GYILIFWFAFEIFQ-----LVGVG--------LFGETE-----------YWLAWL---------- 198

  Fly   184 SMKVQDVFTVGKLLALIMIILSGLYYMATGELEN--------FRNPWEGIYTARNIGYAFYSGLF 240
                       |::.|:...:..:.|: :|::.|        :.:|....:..:.|...|.....
Yeast   199 -----------KIVGLVAYYIFSIVYI-SGDIRNRPAFGFHYWNSPGALSHGFKGIAIVFVFCST 251

  Fly   241 AFGGWNYLNFVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVV--NKPEMLSS------- 296
            .:.|...:.....|.::|.|.:|.|:...:..:..:|:.:.:.|.|.|  :.|.:.:|       
Yeast   252 FYSGTESVALAATESKNPGKAVPLAVRQTLWRILVVYIGIAVFYGATVPFDDPNLSASTKVLKSP 316

  Fly   297 LAVAVTFGNRVFGPLAFMVPIFVALSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTP 361
            :|:|::......|  |.:|..|:.::....:||.|:..:|.....|.||..||.. .:..::..|
Yeast   317 IAIAISRAGWAGG--AHLVNAFILITCISAINGSLYIGSRTLTHLAHEGLAPKIL-AWTDRRGVP 378

  Fly   362 IPSLIFTCLMSLLMLLTDNVYQLINYFSSVLWLSVVA--SIAGMLWLRHKR------------PD 412
            ||::.....:.|:.|:..:| ...|.:|.::.||.|.  .:.|::...|.|            .:
Yeast   379 IPAITVFNALGLISLMNVSV-GAANAYSYIVNLSGVGVFIVWGVISYTHLRIRKAWVAQGRSIEE 442

  Fly   413 LPRPIKVHLALPITFMVSCVTLVLLP-----------NLEE-----PQNLLIGIGI 452
            ||.....:...|:..:.:.:.|.|:.           |..:     |..:|:.|||
Yeast   443 LPYEALFYPWTPVLSLAANIFLALIQGWSYFVPFDAGNFVDAYILLPVGILLYIGI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_001245996.1 AA_permease_2 27..494 CDD:330980 93/511 (18%)
AGP3NP_116600.1 2A0310 50..517 CDD:273334 91/505 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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