DRSC/TRiP Functional Genomics Resources

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Protein Alignment JhI-21 and RMV1

DIOPT Version :10

Sequence 1:NP_609542.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_196182.1 Gene:RMV1 / 830446 AraportID:AT5G05630 Length:490 Species:Arabidopsis thaliana


Alignment Length:467 Identity:106/467 - (22%)
Similarity:194/467 - (41%) Gaps:82/467 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVTTSLVEPTNGCAAPGNP--NPADGEEKIVLKRKLTLINGVAIIVGTIIGSGIFIAPTGVFIYT 70
            ||||            |:|  :||....:|   :|:|::..|.:|...:.|     .|.|:....
plant    33 GVTT------------GDPATSPARTVNQI---KKITVLPLVFLIFYEVSG-----GPFGIEDSV 77

  Fly    71 ESVGSSL---------LIWLTCGILSTIGALCYAELGTCITRSGGDYAYLLVSFGPLVGFLRLWI 126
            ::.|..|         .||      |...||..||:||....:||...::.::.||..||.:.|:
plant    78 KAAGPLLAIVGFIVFPFIW------SIPEALITAEMGTMFPENGGYVVWVTLAMGPYWGFQQGWV 136

  Fly   127 ALL--IIRPTTQTIVALSFAHYAVKPFFPECDP--PQNAVKLLAAICLTLLTTINCLSVKVSMKV 187
            ..|  :|......|:.|.:    :|...|....  |:.|..|:..:.||.|.......|.|:..:
plant   137 KWLSGVIDNALYPILFLDY----LKSGIPILGSGIPRVAAILVLTVALTYLNYRGLSIVGVAAVL 197

  Fly   188 QDVFTVGKLLALIMIILSGLYYMATGELENFRNPW-------EGIYTARNIGYAFYSGLFAFGGW 245
            ..||::     |..:::|   :|:..:|:..|  |       :|:..:..:...|::    ...|
plant   198 LGVFSI-----LPFVVMS---FMSIPKLKPSR--WLVVSKKMKGVNWSLYLNTLFWN----LNYW 248

  Fly   246 NYLNFVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVVNKPEMLSSLAVAVTFGNRVFGP 310
            :.::.:|.|:::|.|.||||::.|:.||...|:...|.....:...:.|.:.......|..:.|.
plant   249 DSVSTLTGEVENPSKTLPRALFYALLLVVFSYIFPVLTGTGAIALDQKLWTDGYFADIGKVIGGV 313

  Fly   311 -LAFMVPIFVALSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTPIPSLIFTCLMSLL 374
             |.:.:....|.|..|.....:.:.:......|:.|.||:.|.. ..:.:||...::|:.  |.:
plant   314 WLGWWIQAAAATSNMGMFLAEMSSDSFQLLGMAERGMLPEVFAK-RSRYRTPWVGILFSA--SGV 375

  Fly   375 MLLTDNVYQLINYFSSVLW-LSVVASIAGMLWLRHKRPDLPRPIKVHLALPITFMVSCVTLVLLP 438
            ::|:...:|.|....::|: ..:|......:.||.|.|...||.|:    |:..:.|.:..:   
plant   376 IILSWLSFQEIVAAENLLYCFGMVLEFITFVRLRMKYPAASRPFKI----PVGVLGSVLMCI--- 433

  Fly   439 NLEEPQNLLIGI 450
                |..:|||:
plant   434 ----PPTVLIGV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_609542.1 2A0308 27..494 CDD:273332 100/446 (22%)
RMV1NP_196182.1 PotE 51..464 CDD:440297 97/434 (22%)

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