DRSC/TRiP Functional Genomics Resources

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Protein Alignment JhI-21 and gb

DIOPT Version :9

Sequence 1:NP_001245996.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001287555.1 Gene:gb / 43265 FlyBaseID:FBgn0039487 Length:517 Species:Drosophila melanogaster


Alignment Length:493 Identity:226/493 - (45%)
Similarity:329/493 - (66%) Gaps:14/493 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VTTSLVEPTNGCAAPGNPNPAD-----------GEEKIVLKRKLTLINGVAIIVGTIIGSGIFIA 62
            :|.|...|.:..|.|. .|||:           ...::|:|::|.|:.|||||:|.|.|||||::
  Fly    17 LTPSSGNPPSSIAQPA-ANPAEKAQCREGSAESDSSRVVIKKQLGLLEGVAIILGIIFGSGIFVS 80

  Fly    63 PTGVFIYTESVGSSLLIWLTCGILSTIGALCYAELGTCITRSGGDYAYLLVSFGPLVGFLRLWIA 127
            |.||....||||:||:||:.||:||.|||||||||||.|.:|||||||:..::|.|..||.||.|
  Fly    81 PKGVIREVESVGASLVIWVLCGLLSMIGALCYAELGTAIPKSGGDYAYIFEAYGSLPAFLYLWDA 145

  Fly   128 LLIIRPTTQTIVALSFAHYAVKPFF-PECDPPQNAVKLLAAICLTLLTTINCLSVKVSMKVQDVF 191
            ::|..|||..|:.|:||.|.::||| ..|:.|:.|::|||||.:..||.:|...:||:.|:|:|.
  Fly   146 MMIFVPTTNAIMGLTFASYVLEPFFGGACEIPKIALQLLAAITICFLTYLNSYYMKVTTKMQNVI 210

  Fly   192 TVGKLLALIMIILSGLYYMATGELENFRNPWEGIYT-ARNIGYAFYSGLFAFGGWNYLNFVTEEL 255
            ...|:.||::|||.||.:|..|.:|||..|::...| ...:..|||||:|::.|||||||:||||
  Fly   211 MFTKIAALVLIILVGLVWMMMGNVENFTRPFDNTETDPGKMSVAFYSGIFSYAGWNYLNFMTEEL 275

  Fly   256 QDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVVNKPEMLSSLAVAVTFGNRVFGPLAFMVPIFVA 320
            :|||:||||||:|::||||.||||.|:||.||::..||::|.|:|||||:::.|..:.::|:.||
  Fly   276 RDPYRNLPRAIYISLPLVTGIYVLANVAYLAVLSPSEMIASNAIAVTFGDKILGVFSLIIPLMVA 340

  Fly   321 LSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTPIPSLIFTCLMSLLMLLTDNVYQLI 385
            :|.|||::..:.||:|:...||:.||:|.......||..||:|||:|.|.:|::||:..:||.||
  Fly   341 ISAFGGLSVHIMTSSRICFVGARNGHMPAILSHISVKSYTPLPSLVFLCFLSIVMLVVSDVYVLI 405

  Fly   386 NYFSSVLWLSVVASIAGMLWLRHKRPDLPRPIKVHLALPITFMVSCVTLVLLPNLEEPQNLLIGI 450
            .|.|.|....::.|::.:|:.|:.||.:.|||||.:.:|..|::.|..||::|....|..:.:|:
  Fly   406 TYASIVESFFIMLSVSAVLYFRYTRPCMERPIKVAMWIPALFVIVCAFLVVVPIYVAPYEVGMGV 470

  Fly   451 GITLAGIPFYYAFIARKKKPKCYGRLSNSVVEICRAIF 488
            .||:.||||||..:..|.|||......:||...|:.:|
  Fly   471 LITIIGIPFYYVGVVWKNKPKWVQSTIDSVTFTCQKLF 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_001245996.1 AA_permease_2 27..494 CDD:330980 221/475 (47%)
gbNP_001287555.1 2A0308 32..515 CDD:273332 221/478 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I255
eggNOG 1 0.900 - - E2759_KOG1287
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I235
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D339093at33208
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 1 1.000 - - mtm9156
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11785
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
109.920

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