DRSC/TRiP Functional Genomics Resources

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Protein Alignment JhI-21 and CG5535

DIOPT Version :10

Sequence 1:NP_609542.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster


Alignment Length:440 Identity:96/440 - (21%)
Similarity:183/440 - (41%) Gaps:70/440 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TNGCAAPGNPNPADGEEKIVLKRKLTLINGVAIIVGTIIGSGIFIAPTGVFIYTESVGSSLLI-W 80
            ||.........|.:...:..|.:.|:..:..|:.:|:.:|.|:::....|  ..:..|.:::: :
  Fly    16 TNAFRVLTRKKPLEDSNESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEV--SKQYAGPAVVVSF 78

  Fly    81 LTCGILSTIGALCYAELGTCITRSGGDYAYLLVSFGPLVGFLRLWIALLIIRPTTQTIVALSFAH 145
            |...|.|....|||||.|..:.::|..|.|..|:.|..:.||..|..:|.....:.::|.     
  Fly    79 LIAAIASIFAGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVK----- 138

  Fly   146 YAVKPFFPE-CDPPQNAV----------------KLLAAICLTLLTTINCLSVKVSMKVQDVFTV 193
             .:..:..: |..|.::.                .|.|.:...|.:....:..|.|.:|.:|||:
  Fly   139 -GLSTYLDQLCGNPMSSFLGTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTM 202

  Fly   194 GKLLALIMIILSGLYYMATGELENFRNPW----EGIYTARNIGYAFYSGL--------FAFGGWN 246
            ..|..::.:|::||:.:::   .|:..|.    ||......:.|. .||:        :.|.|::
  Fly   203 LNLGVVLFVIIAGLFKVSS---SNWSIPKSQVPEGYGDGGFMPYG-VSGIIKGAAVCFYGFIGFD 263

  Fly   247 YLNFVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVVNKPEMLSSLAVAVTFGNRVFGPL 311
            .:....||.::|.|::|.|:.:::       .::.||||.|.....|:...     |......||
  Fly   264 CIATAGEEAKNPKKSIPFAVIVSL-------AMIFLAYFGVSTVLTMMLPY-----FEQDEKAPL 316

  Fly   312 ------------AFMVPIFVALSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTPIPS 364
                        .::|.|.........:.|.:|...|:....:.:|.|.||......|.:||...
  Fly   317 PHVFRINGWHVAEYVVSIGAMFGLCSSMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKG 381

  Fly   365 LIFTCLMSLLMLLTDNVYQLINYFS--SVLWLSVVASIAGMLWLRHKRPD 412
            .:.|.:::.::....|:.||:|..|  ::|..|:|||.  :|.||::..|
  Fly   382 TMITGMLTGILAAVFNLSQLVNMMSIGTLLAYSMVASC--VLMLRYEVDD 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_609542.1 2A0308 27..494 CDD:273332 94/430 (22%)
CG5535NP_649019.2 2A0303 20..585 CDD:273330 94/436 (22%)

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