DRSC/TRiP Functional Genomics Resources

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Protein Alignment JhI-21 and sbm

DIOPT Version :10

Sequence 1:NP_609542.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster


Alignment Length:489 Identity:200/489 - (40%)
Similarity:303/489 - (61%) Gaps:24/489 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ANGVTTSLVEPTNGCAAPGNPNPADGEEK-------------IVLKRKLTLINGVAIIVGTIIGS 57
            |||   ||  .|.|..||...:...|..:             :.|:|:|.|.:|||:||||:|||
  Fly    41 ANG---SL--GTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGS 100

  Fly    58 GIFIAPTGVFIYTESVGSSLLIWLTCGILSTIGALCYAELGTCITRSGGDYAYLLVSFGPLVGFL 122
            |||::|:|:.:.|.|||.|.:|||.||:||.:|||.||||||..|.||.::||.:.::||...||
  Fly   101 GIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFL 165

  Fly   123 RLWIALLIIRPTTQTIVALSFAHYAVKPFFPECDPPQNAVKLLAAICLTLLTTINCLSVKVSMKV 187
            ..|::.|:::|:...|:.||||.|||:.|..|||||:..||::|.:.:.::..:||.||.:.|.|
  Fly   166 FSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAV 230

  Fly   188 QDVFTVGKLLALIMIILSGLYYMATGELENFRNPWEGIYTARNIG---YAFYSGLFAFGGWNYLN 249
            |:|||..||:|::::|..|.:.:..|..::..|.:.|  ...|:|   .|||:||:|:.|||.||
  Fly   231 QNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNG--PMPNVGAIATAFYTGLWAYDGWNNLN 293

  Fly   250 FVTEELQDPYKNLPRAIWIAMPLVTSIYVLVNLAYFAVVNKPEMLSSLAVAVTFGNRVFGPLAFM 314
            :||||:::|.|||||:|.|.:||||..|.|:|::|.|.::..||:.|.|||||||||:.|.||::
  Fly   294 YVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWL 358

  Fly   315 VPIFVALSTFGGVNGVLFTSARLFATGAQEGHLPKFFQLFHVKQQTPIPSLIFTCLMSLLMLLTD 379
            :|:.|.:||||..||.||.:.||....::||||.......||::.||.|.|||..|::..|:|..
  Fly   359 MPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHG 423

  Fly   380 NVYQLINYFSSVLWLSVVASIAGMLWLRHKRPDLPRPIKVHLALPITFMVSCVTLVLLPNLEEPQ 444
            .:..||::||...|:....::..::.:|:.:|:.|||.||.:.:|:..:|..|.||..|..|.|:
  Fly   424 TIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPR 488

  Fly   445 -NLLIGIGITLAGIPFYYAFIARKKKPKCYGRLS 477
             ..|..:....||:.||..|:.....|:...:::
  Fly   489 VEYLYALLFIFAGLIFYVPFVKLGMTPRFMNKVT 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_609542.1 2A0308 27..494 CDD:273332 191/468 (41%)
sbmNP_727785.1 2A0308 53..532 CDD:273332 192/472 (41%)

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