DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment JhI-21 and SPCPB1C11.02

DIOPT Version :9

Sequence 1:NP_001245996.1 Gene:JhI-21 / 34624 FlyBaseID:FBgn0028425 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_588425.1 Gene:SPCPB1C11.02 / 2539031 PomBaseID:SPCPB1C11.02 Length:505 Species:Schizosaccharomyces pombe


Alignment Length:565 Identity:132/565 - (23%)
Similarity:201/565 - (35%) Gaps:180/565 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DGEEKIVLKRKLTLINGVAIIVGTIIGSGIFIAPTGV-FIYTESVGSSLLIWLTCGILSTIGALC 93
            :||.   |.|.|:......:..|.|||:|:|:   |: ....||..:||||     ..|.:|...
pombe    10 EGES---LHRSLSASQIQMLAFGGIIGTGLFL---GIGSSLAESGPASLLI-----SFSVLGVSV 63

  Fly    94 YAELGTCITRSGGDYA-YLLV--SFGPLVG--------FLRLW-------IAL--------LIIR 132
            |     |...:.|:.: |:.|  ||...||        |...|       |||        |::.
pombe    64 Y-----CTMLALGEMSVYMPVAGSFCTYVGRYVDEALSFSLTWNYWLNDTIALASHVLATRLVVD 123

  Fly   133 ----PTTQTIVALSFAHYAVKPFFPECDPPQNAVKLLAAICLTLLTTINCLSVKVSMKVQDVFTV 193
                ||....|:.|.:          ..|.:.||:        ::|.|..||..:.:.:..|...
pombe   124 FWLIPTEGDPVSASLS----------LPPWKEAVR--------IITPITSLSANIILNMLPVGGF 170

  Fly   194 G---------KLLALIMIILSGL----------------YYMATGELENFRNPWEGIYTARNIGY 233
            |         |:..:...|::|:                |:...|...|      ||     ||.
pombe   171 GEIEYWLSSIKVFTVAAFIVNGILCNLGVNNEKKFIGFRYWKDPGAFNN------GI-----IGV 224

  Fly   234 --AFYSGLFAFGGWNYLNFVTEELQDPYKNLPRAIWIAMPLVTSIYVL------VNLAYFAVVNK 290
              :|.:..||:.|...:.....|.:.|...||:||......|..:|::      :||.|    |.
pombe   225 ISSFVNAAFAYAGTESIALTAGEAKSPITTLPKAIRFTAHRVLLLYIISVLVVGINLPY----NT 285

  Fly   291 PEMLSSLAVAV---TFGNRVFG-PLAFMVPIFVALST-FGGVNGVLFTSARLFATGAQEGHLPKF 350
            |. |...:|.:   ||..:.|| |.|..:...|.||: ....|..|:...||..:.|:.||.||.
pombe   286 PG-LDGDSVRMSPFTFVFKKFGVPGAASIMNLVILSSALSAGNHSLYAGTRLLYSLAKSGHAPKV 349

  Fly   351 FQLFHVKQQTPIPSLIFTCLMSLLMLLTD----------NVYQLINYFSSVLWLSVVASIAGMLW 405
            |...: |...|..|::.|...::|.|::.          ||..:.|..|   |:.:..|.     
pombe   350 FSKCN-KHGIPWLSVLATSATAILCLMSSQAGKTWGFLLNVIAVSNQIS---WIFIAVSS----- 405

  Fly   406 LRHKRPDLPRPIKVHLALPITFMVSCVTLVLLPNLEEPQN-----LLIGIGITLAGIPFYYAFIA 465
            ||.::. |....|.|             .:..||...|..     ||.|:.:.|.|....|.|  
pombe   406 LRFRKA-LRVQGKTH-------------RLYFPNWTYPVGPYIIILLNGVFLFLQGYKSLYPF-- 454

  Fly   466 RKKKPKCYGRLSNSV-----VEICRAIF-------NTTIIESNEA 498
                     |||..|     :.|...::       .|.::.|:||
pombe   455 ---------RLSLFVSYYMEIPIVLGLYLIWKIYKKTKLVSSSEA 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JhI-21NP_001245996.1 AA_permease_2 27..494 CDD:330980 129/559 (23%)
SPCPB1C11.02NP_588425.1 2A0310 16..485 CDD:273334 126/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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