DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and Zbtb10

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_077815.2 Gene:Zbtb10 / 80338 RGDID:708377 Length:890 Species:Rattus norvegicus


Alignment Length:569 Identity:107/569 - (18%)
Similarity:184/569 - (32%) Gaps:209/569 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFIN-----SNQKQQQFSIHNPLKITIRN 84
            |:.||:....||:.:.:...   ....|..:|.|.|:|..     ||::..     |....|..:
  Rat   374 LDEQRKKDILCDVSIVVSGK---IFKAHKNILVAGSRFFKTLYCVSNKESP-----NQNNTTHLD 430

  Fly    85 FSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNLYQLQPLGEAKEATEIPAPGEA 149
            .:..|....|:||.|...:.::.::.:....:|..|.::|::...:    ...|:|..|....||
  Rat   431 IAAVQGFSVILDFLYSGNLVLTSQNAIEVMTVASYLQMSEVVQTCR----NFIKDALNISIKSEA 491

  Fly   150 QPNPDPEKKAEAVFENRQ----------------SYFKLKNPRAVKSSSKVNYCIGCDFKCYQVQ 198
                 || .....:.||:                |::..:|...:.|:.|:.. .||:....|::
  Rat   492 -----PE-SVVVDYNNRKPVSRDGLTSSRDQKIASFWATRNLTNLASNIKIEN-DGCNVDEGQIE 549

  Fly   199 K----------------------------MIEHMGSCEP--------------------SHLI-- 213
            .                            :..:|.|.|.                    |..|  
  Rat   550 NYQMNDSNWVQDGSPELAENESQGKTKVFIWNNMASQETGKARRKNQTTKRFVYNIPPNSETIVE 614

  Fly   214 -CSLCE------------------VGFLDW---------REYDTHL------RRHSGDLRKPFFC 244
             ||:.:                  |..||.         |..:|:|      .:.:||.......
  Rat   615 DCSVMQPPVAYPEENKALLIKEEPVSDLDGALLSGPDGDRTMNTNLLAEACSSQDAGDAAGASHD 679

  Fly   245 LQCGIRFNT----RAALLVHQPKHSTETPH-ICPHCGKGFK-------------WKQGLSNHILV 291
            .:.|:...|    :..||   |..|.:..: :.|.....||             |:.|.|:.|: 
  Rat   680 FKYGLMPGTSSDFKYGLL---PSTSNDFKYGLLPGAPNDFKYGLLPESWPTQEPWENGDSSLIM- 740

  Fly   292 HNPEKQMLCDVCGYSTTHMKALKSHKLLHTGEFFACTVSGCKHRANRKENLKLHIETHKQGRDFI 356
                .::.|..|.|...:.:.||.|.|:|:|.                             |.|.
  Rat   741 ----NKLKCPHCSYVAKYRRTLKRHLLIHSGV-----------------------------RSFK 772

  Fly   357 CEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLC----------GFSSHRSDKMKEHVQRVHTEK 411
            ||:||..|::.:::|||:|.|.::  .:|||.:|          |. .|.|.:....:..|...:
  Rat   773 CEICGKMFTRREHVKRHSLVHKKD--KKYKCMVCKKIFMLAASVGI-KHGSRRYGVCMDCVDKSQ 834

  Fly   412 P-VQLELSETVDSSFPDDFELPVIETSPKKKPKSVKSKTIRNVNPDKRL 459
            | .|..:.:..|:.||.|.|....|                .|.||:.|
  Rat   835 PGGQESIDQGQDTEFPRDEEYEENE----------------GVEPDEEL 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 57/321 (18%)
C2H2 Zn finger 214..234 CDD:275368 8/52 (15%)
C2H2 Zn finger 244..264 CDD:275368 5/23 (22%)
C2H2 Zn finger 272..292 CDD:275368 7/32 (22%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..349 CDD:275368 0/18 (0%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..408 CDD:275368 5/30 (17%)
Zbtb10NP_077815.2 ZnF_TTF 240..>307 CDD:214739
BTB_POZ 363..484 CDD:365784 24/121 (20%)
zf-H2C2_5 743..767 CDD:404746 8/23 (35%)
C2H2 Zn finger 745..765 CDD:275368 7/19 (37%)
zf-H2C2_2 758..782 CDD:404364 13/52 (25%)
C2H2 Zn finger 773..793 CDD:275368 9/19 (47%)
zf-H2C2_2 785..808 CDD:404364 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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