DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and ZNF143

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_005253178.1 Gene:ZNF143 / 7702 HGNCID:12928 Length:653 Species:Homo sapiens


Alignment Length:273 Identity:75/273 - (27%)
Similarity:113/273 - (41%) Gaps:42/273 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 DPEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYCIGCDFKCYQVQKMIEHMGSCEPSHLICSLCE 218
            :.|||.:.|.:...:....|:.::.:.:.:..| .||. |.|..           ..||      
Human   224 EQEKKMQIVLQGHATRVTAKSQQSGEKAFRCEY-DGCG-KLYTT-----------AHHL------ 269

  Fly   219 VGFLDWREYDTHLRRHSGDLRKPFFC--LQCGIRFNTRAALLVHQPKHSTETPHIC--PHCGKGF 279
                     ..|.|.|:||  :|:.|  ..||..|.|...|..|...|:.|.|:.|  .:|.|.|
Human   270 ---------KVHERSHTGD--RPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSF 323

  Fly   280 KWKQGLSNHILVHNPEKQMLC--DVCGYSTTHMKALKSHKLLHTGEF-FACTVSGCKHRANRKEN 341
            |....|..||..|..|:...|  :.||.|.|.....|.|...||||. :.||..||........|
Human   324 KTSGDLQKHIRTHTGERPFKCPFEGCGRSFTTSNIRKVHVRTHTGERPYYCTEPGCGRAFASATN 388

  Fly   342 LKLHIETHKQGRDFICEVCGC--KFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKEHV 404
            .|.|:..|...:.::|.|.||  :|::..:|.:|.:.||.:.|  |.|..||.:..:...:..|.
Human   389 YKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKP--YNCNHCGKTYKQISTLAMHK 451

  Fly   405 QRVHTE-KPVQLE 416
            :..|.: :|::.|
Human   452 RTAHNDTEPIEEE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 63/218 (29%)
C2H2 Zn finger 214..234 CDD:275368 2/19 (11%)
C2H2 Zn finger 244..264 CDD:275368 7/21 (33%)
C2H2 Zn finger 272..292 CDD:275368 8/21 (38%)
C2H2 Zn finger 300..320 CDD:275368 7/21 (33%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 7/21 (33%)
C2H2 Zn finger 387..408 CDD:275368 4/20 (20%)
ZNF143XP_005253178.1 Trp-synth-beta_II <97..207 CDD:294246
C2H2 Zn finger 254..276 CDD:275368 9/49 (18%)
zf-H2C2_2 268..295 CDD:290200 12/43 (28%)
COG5048 279..>337 CDD:227381 20/59 (34%)
C2H2 Zn finger 284..306 CDD:275368 7/21 (33%)
zf-H2C2_2 299..325 CDD:290200 9/25 (36%)
zf-C2H2_8 314..429 CDD:292531 38/114 (33%)
C2H2 Zn finger 314..336 CDD:275368 8/21 (38%)
zf-H2C2_2 328..355 CDD:290200 9/26 (35%)
C2H2 Zn finger 344..366 CDD:275368 7/21 (33%)
zf-H2C2_2 360..385 CDD:290200 10/24 (42%)
C2H2 Zn finger 374..396 CDD:275368 7/21 (33%)
zf-H2C2_2 388..414 CDD:290200 8/25 (32%)
C2H2 Zn finger 404..426 CDD:275368 7/21 (33%)
C2H2 Zn finger 434..453 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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