DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and gzf1

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001039101.1 Gene:gzf1 / 733920 XenbaseID:XB-GENE-1020991 Length:697 Species:Xenopus tropicalis


Alignment Length:627 Identity:142/627 - (22%)
Similarity:206/627 - (32%) Gaps:207/627 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NYLNNQ---RRTGQFCDLLLELDSDDS-LSLSVHFCVLAAQSQ-----FINSNQKQQQFSIHNPL 78
            |.||..   |..|..||:.:.::...| :..|.|..||||.|:     |||||......:..:..
 Frog    16 NLLNEMYQLRLLGHLCDVTVRVEHHGSKMEFSAHKSVLAASSKYFKEVFINSNILDCPNAYIHLN 80

  Fly    79 KITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNL-------------YQ 130
            :|...:|:      :.:||.|...|.|.::......::|:.|...||...             ..
 Frog    81 EIPSVDFA------SFLDFVYTARVEVEEDRVQRMIDVAEKLRCPELAETCFQLKKQMLESVWLD 139

  Fly   131 LQPLGEAKEATEIPAPGEAQP---------------NPDP------------------------- 155
            ||.:.|.:||.|...|.:..|               :|.|                         
 Frog   140 LQNISEVQEADEDIDPLQLNPLTGLQSPMAEPTQITDPTPLFTDSTVGQNMDQACVDTAFIATEE 204

  Fly   156 --EKKAEAV----FENRQSYFKLKNPRAVKSSSKVNY---------------------------- 186
              |||.||:    .:.::|..::...:||....|..|                            
 Frog   205 NTEKKKEALKKPQAKPKRSTGRVSGKKAVVEIPKKKYTRKLREQQNIAQTRPIENGNDGVQVPSN 269

  Fly   187 ------------------------------------------CIGC-----DFKCYQVQKMIEHM 204
                                                      |..|     |.|.:......||:
 Frog   270 MQTADEQSEDSVKAEDDSHCEDSESYKNGDQDNNDQSANMVSCPVCGKSFADEKSFLKHSKQEHL 334

  Fly   205 GS-----CE------------PSH----------LICSLCEVGFLDWREYDTH-LRRHSGDLRKP 241
            .|     |:            .||          ..|.||...|...::...| ::.|.|. |:.
 Frog   335 DSEIVFRCDICSQTFANRCNLKSHQRHVHSNERRFPCELCGKKFKRKKDIKRHIIQVHEGG-RER 398

  Fly   242 FFCLQCGIRFNTRAALLVHQPKHSTETPHICPHCGKGFKWKQGLSNHILVHNPEKQMLCDVCGYS 306
            .||..||...:::.:|.:|:..|:.:.|..||||...|.....|..|:..|..||..:||.|...
 Frog   399 HFCKLCGKGLSSKTSLSLHERTHTGDKPFSCPHCQAKFSQTSALKTHLRTHTGEKPFVCDECDAR 463

  Fly   307 TTHMKALKSHKLLHTGEF-FACTVSGCKHRANRKENLKLHIETHKQGRDFICEVCGCKFSQSKNL 370
            .|....|..||..||||. |.|...| |..|: ||.||.|...|...:.|.|:.|...|:|..:|
 Frog   464 FTQNHMLIYHKRCHTGEKPFMCETCG-KSFAS-KEYLKHHNRIHTGSKPFKCDFCCRTFAQRNSL 526

  Fly   371 KRHALKHTENGPNRYKCQLCGFSSHRSDKMKEHVQRVHT-EKPVQLELSETVDSSFPD------- 427
            .:|...||  |...|.|..||....:.:.::.| .|:|| |||.   :......:|.|       
 Frog   527 YQHIKVHT--GERPYCCDQCGKQFTQLNALQRH-HRIHTGEKPF---MCSACQRTFTDQSTLRRH 585

  Fly   428 ----DFELP----VIETSPKKKPKSVKSKTIR----NVNPDK 457
                |...|    ::...|..|.:..||:..|    |...||
 Frog   586 TSIHDKNTPWKSFLVVLDPASKDEGQKSEEGREDLPNPGADK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 69/238 (29%)
C2H2 Zn finger 214..234 CDD:275368 5/20 (25%)
C2H2 Zn finger 244..264 CDD:275368 5/19 (26%)
C2H2 Zn finger 272..292 CDD:275368 7/19 (37%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..349 CDD:275368 8/18 (44%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 387..408 CDD:275368 5/20 (25%)
gzf1NP_001039101.1 BTB 21..125 CDD:279045 28/109 (26%)
BTB 32..133 CDD:197585 25/106 (24%)
C2H2 Zn finger 312..333 CDD:275368 4/20 (20%)
C2H2 Zn finger 342..363 CDD:275368 3/20 (15%)
C2H2 Zn finger 401..421 CDD:275368 5/19 (26%)
zf-H2C2_2 413..438 CDD:290200 9/24 (38%)
zf-C2H2_8 426..532 CDD:292531 40/107 (37%)
C2H2 Zn finger 429..449 CDD:275368 7/19 (37%)
zf-H2C2_2 441..466 CDD:290200 8/24 (33%)
C2H2 Zn finger 457..477 CDD:275368 7/19 (37%)
zf-H2C2_2 469..494 CDD:290200 11/25 (44%)
C2H2 Zn finger 485..505 CDD:275368 9/21 (43%)
zf-H2C2_2 497..522 CDD:290200 8/24 (33%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
zf-H2C2_2 525..550 CDD:290200 9/26 (35%)
COG5048 537..>594 CDD:227381 14/60 (23%)
C2H2 Zn finger 541..561 CDD:275368 5/20 (25%)
zf-H2C2_2 553..577 CDD:290200 7/27 (26%)
C2H2 Zn finger 569..589 CDD:275368 2/19 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I4089
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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