DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and zbtb24

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001018866.2 Gene:zbtb24 / 553955 ZFINID:ZDB-GENE-081022-123 Length:678 Species:Danio rerio


Alignment Length:541 Identity:127/541 - (23%)
Similarity:210/541 - (38%) Gaps:127/541 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SQTMQSIPTLHQPLH-SKVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFIN--- 64
            |.:..::..||...| ..:.:..:..||:...||:.|.:   :.:....|..:|||.|::.:   
Zfish    10 SSSSPAVLALHSATHKDTILHKFDTLRRSELLCDITLIV---EDVHFKAHKALLAASSEYFSALF 71

  Fly    65 SNQKQQQFSIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNLY 129
            :.::|...|::....:|...||      ::::|.|..:|.|.:.......|:|:.|.:.:|:..:
Zfish    72 TAEEQVSQSLYKLDGMTANTFS------SVLEFMYSAVVLVDESSSEQLMEMARFLVIPDLIKAH 130

  Fly   130 -----------------------------------QLQPLGEAKEATEIPAP-----GEAQPNPD 154
                                               |.|...|.:|..|.||.     .:.:.||.
Zfish   131 EDLQAVDEHMQVKRKRGRPKKNQDLSQKENPESELQAQSSSEIQEVNEEPASPATDGSDGEFNPR 195

  Fly   155 PEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYCIGCD-------FKCYQVQKMIEHMGSCEPSHL 212
            .|::       |:...|:|.|..:|.....:...|.:       .|....:...|..|....|||
Zfish   196 EERR-------REGKRKIKQPIRLKGFRMDDLMEGKEPGKRGRRRKYPDTEARCEECGKVFKSHL 253

  Fly   213 ICSLCEVGFLDWREYDTHLRRHSGDLRKPFFCLQCGIRFNTRAALLVHQPKHSTETPHICPHCGK 277
            ...:             |.|.|:|:  |||.|..||..|..:..|||||..|:.|.|:||..|.|
Zfish   254 FLKI-------------HQRTHTGE--KPFRCSVCGKEFTQKHTLLVHQRMHTGEKPYICTVCSK 303

  Fly   278 GFKWKQGLSNHILVHNPEKQMLCDVCGYSTTHMKALKSHKLLHTGEFF-ACTVSGCKHRANRKEN 341
            ....|..|..|:.:|...|...|:.||.|.:..:.||||..:|||:.. .|  :.|.|:......
Zfish   304 ALSTKHSLLEHMNLHTENKLFTCEECGKSFSQQRQLKSHNRVHTGKGLPEC--AECHHKFMDAAQ 366

  Fly   342 LKLHIETHKQGRDFICEVCG-----------------------CK-----FSQSKNLKRHALKHT 378
            ||.|:.||...:.|.||:||                       ||     ||.....:||.:.||
Zfish   367 LKKHLRTHTGEKPFTCEICGKCFTAKSTLQTHIRIHRGEKPYVCKVCDKTFSDPSARRRHEVSHT 431

  Fly   379 ENGPNRYKCQLCGFSSHRSDKMKEHVQRVHTEK-PVQLELSETVDSSFPDDFELPVIETSPKKKP 442
              |...:.|.:|..|..|.|.:|.|::..:.|. |.|.|.::....|.|:           :::.
Zfish   432 --GKKTFSCSICKVSFARKDNLKAHIKTHNKENPPAQAESTDKPPHSAPE-----------QQQQ 483

  Fly   443 KSVKSKTIRNVNPDKRLKTLL 463
            :..:.:..:..:.||.|.::|
Zfish   484 QQEQEQQQQQTSGDKELHSIL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 73/238 (31%)
C2H2 Zn finger 214..234 CDD:275368 2/19 (11%)
C2H2 Zn finger 244..264 CDD:275368 9/19 (47%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 10/47 (21%)
C2H2 Zn finger 387..408 CDD:275368 7/20 (35%)
zbtb24NP_001018866.2 BTB 32..129 CDD:279045 23/105 (22%)
BTB 43..129 CDD:197585 20/94 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..211 14/78 (18%)
C2H2 Zn finger 242..262 CDD:275368 7/32 (22%)
zf-H2C2_2 255..279 CDD:290200 11/38 (29%)
COG5048 <266..456 CDD:227381 64/193 (33%)
C2H2 Zn finger 270..290 CDD:275368 9/19 (47%)
zf-H2C2_2 283..307 CDD:290200 12/23 (52%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
zf-H2C2_2 310..335 CDD:290200 8/24 (33%)
zf-C2H2 324..346 CDD:278523 8/21 (38%)
C2H2 Zn finger 326..346 CDD:275368 8/19 (42%)
C2H2 Zn finger 354..374 CDD:275368 6/21 (29%)
zf-H2C2_2 367..390 CDD:290200 10/22 (45%)
C2H2 Zn finger 382..402 CDD:275368 4/19 (21%)
zf-H2C2_2 395..418 CDD:290200 2/22 (9%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
zf-C2H2 436..458 CDD:278523 7/21 (33%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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