DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and CG7987

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:497 Identity:110/497 - (22%)
Similarity:182/497 - (36%) Gaps:131/497 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QSIPTLHQPLHSKVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFINSNQKQQQF 72
            |.:...|..:|.|.|    :|...|...|:....|.:.:...|.|.|....:| |.::.:.....
  Fly   434 QDLLRRHAKMHCKPS----DQAAVGSNSDVTAGGDVELAKDSSGHCCNTCGKS-FPSALEMLAHA 493

  Fly    73 SIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNLYQLQPLGEA 137
            .||    .....|.|..|   .:.|:.|..:   |.| ||.|..:::.|.:.:|.         .
  Fly   494 EIH----ARFPPFKCVLC---GISFYEEQAI---KRH-LHTRHPSELNANSCVLC---------G 538

  Fly   138 KEATEIPAPGEAQPNPDPEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYCIGCDFKCYQVQKMIE 202
            ||.                :..:|:.::...:          |..|.:.|..|....:...::..
  Fly   539 KEC----------------RDRKALIKHAWDH----------SREKCHSCSKCGKNFHNKARLKR 577

  Fly   203 HMGSCEPSHLICSLCEVGFLDWREYDTHLRRHSGDLRKP---FFCLQCGIRFNTRAALLVHQPKH 264
            ||.|.....::|.:|:..|.|.|....|  |||.....|   |.||:||..|.:|::..:|...|
  Fly   578 HMASHRDKSVVCEVCQEEFPDGRTLSNH--RHSHSTTTPGKLFPCLECGKTFGSRSSQQIHVRIH 640

  Fly   265 STETPHICPHCGKGFKWKQGLSNHILVHNPEKQMLCDVCGYSTTHMKALKSHKLLHTGEF-FACT 328
            :.|.|:.|.:|.|.|                            .....|:.|:.:||||. :||:
  Fly   641 TGERPYGCRYCWKAF----------------------------ADGGTLRKHERIHTGEKPYACS 677

  Fly   329 VSGCKHRANRKENLKLHIETHKQGRD-----FICEVCGCKFSQSKNLKRHALKHTEN-------- 380
            |  |....|::..|:.||.:|..|.|     :.|.||....:.|.:|.:|.::|:::        
  Fly   678 V--CPRAFNQRVVLREHIRSHHSGLDVARNTYHCTVCSEDLASSNDLIQHLIQHSDSNTAKQRQP 740

  Fly   381 --GPNRYKCQLCGFSSHRSDKMKEHVQRVH---TEKPVQLELSETVDSSFPD---------DFEL 431
              ||.:||         |..|::.| :..|   ..|.|..:..|.:.....:         ||::
  Fly   741 VTGPRKYK---------RRRKLQPH-EIAHMRAANKHVNGDEEEAIGEGDAEECASDIDFCDFDV 795

  Fly   432 PVIE------TSPKK-KPKSVKSKTIRNVNPDKRLKTLLPKE 466
            ..::      .|||| |.|...:.|..:..|....|...|.:
  Fly   796 ENVDDIFDMAESPKKEKRKRGSAATKADAKPVTNGKAAKPAQ 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 58/228 (25%)
C2H2 Zn finger 214..234 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..292 CDD:275368 4/19 (21%)
C2H2 Zn finger 300..320 CDD:275368 2/19 (11%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 387..408 CDD:275368 3/20 (15%)
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 87/382 (23%)
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 424..444 CDD:275368 2/9 (22%)
C2H2 Zn finger 476..496 CDD:275368 3/20 (15%)
C2H2 Zn finger 504..523 CDD:275368 7/25 (28%)
C2H2 Zn finger 534..554 CDD:275370 4/44 (9%)
C2H2 Zn finger 562..582 CDD:275370 4/19 (21%)
C2H2 Zn finger 589..609 CDD:275368 8/21 (38%)
C2H2 Zn finger 620..640 CDD:275368 7/19 (37%)
C2H2 Zn finger 648..668 CDD:275368 6/47 (13%)
zf-H2C2_2 661..685 CDD:290200 10/25 (40%)
C2H2 Zn finger 676..696 CDD:275368 7/21 (33%)
C2H2 Zn finger 709..726 CDD:275371 5/16 (31%)
Hph 921..>1017 CDD:290417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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