DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and CG2678

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_649750.1 Gene:CG2678 / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster


Alignment Length:423 Identity:84/423 - (19%)
Similarity:144/423 - (34%) Gaps:113/423 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CVLAAQSQF---INSNQKQQQF--------SIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSK 107
            ||||.|:.|   ..|.|..|.|        :..|.:.:...|....|.::        ..:.:..
  Fly    64 CVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPENQVHLAACNGDKNQIIN--------QKMQLKS 120

  Fly   108 EHELHFRELAQILAVTELLNLYQLQPLGEAKEATEIPAPGE----------------AQPNPDPE 156
            :.:...:::.:.....:  :|.|.|.|....:...|..|.|                |...|...
  Fly   121 DRQQDTQQMTKTQKPDD--DLSQKQTLQAKLQEGNIDGPPESFTLHPRKRTCRTEEQADMIPKEA 183

  Fly   157 KKAEAVFENRQSYFKLKNPRAVK---SSSKV--------NYCIGCDFKCYQVQKMIEHMGS--CE 208
            .::..:..:...|:..  |...|   |.:::        |.|..|.....|...:..|:.:  .:
  Fly   184 TRSTKMICDADGYYNC--PHCSKRFCSQTQLRTHITDLCNRCPYCPRTYMQKSNLKRHLRNHLSK 246

  Fly   209 PSHLICSLCEVGFLDWREYDTHLRRHSGDLRKPFFCLQCGIRFNTRAALLVHQPKH--------- 264
            |:|. |..|...|:.......|||.|..|  .|..|.||...|.....|.:|:.:|         
  Fly   247 PAHK-CFHCSKAFMRKDHLKRHLRTHDSD--GPLSCSQCSAVFIEHVQLEIHRREHKQRPGSSKS 308

  Fly   265 -STETP---------HICPHCGKGFKWKQGLSNHILVHNP--EKQMLCDVCGYSTTHMKALKSHK 317
             ||:.|         .:.|      ||.:...|......|  :.:.:||:|....:.:.|||.|.
  Fly   309 ESTKDPDSDDSDQAQDLKP------KWTKNTFNGTCSIPPMLKPKPICDICQKKFSSVYALKRHM 367

  Fly   318 LLHTGEFFACTVSGCKHRANRKENLKLHIETHKQGRDFICEVCGCKFSQSKNLKRHALKHTENGP 382
            |.|                ||:.:||.            |..|..:|...|:||||...|.   .
  Fly   368 LTH----------------NRQHHLKK------------CTYCSEEFKTEKHLKRHERGHM---G 401

  Fly   383 NRYKCQLCGFSSHRSDKMKEHVQRVHTEKPVQL 415
            :.::|:.|.......:.:::|.:|:|:...:.:
  Fly   402 DLFRCEFCSLVFVDVNYLRKHKKRIHSNNVIAM 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 52/232 (22%)
C2H2 Zn finger 214..234 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 4/19 (21%)
C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..349 CDD:275368 4/18 (22%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..408 CDD:275368 4/20 (20%)
CG2678NP_649750.1 zf-AD 8..85 CDD:214871 9/20 (45%)
COG5048 220..>284 CDD:227381 19/66 (29%)
C2H2 Zn finger 223..243 CDD:275368 4/19 (21%)
zf-C2H2 249..271 CDD:278523 7/22 (32%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..427 CDD:275368 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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