DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plzf and zbtb14

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_998701.1 Gene:zbtb14 / 406857 ZFINID:ZDB-GENE-040426-2946 Length:442 Species:Danio rerio


Alignment Length:469 Identity:110/469 - (23%)
Similarity:182/469 - (38%) Gaps:89/469 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SQTMQSIPTLHQPLHSKVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFINSNQK 68
            |:|::.:...|:.:..|:   ||.||..|:.||:.:.:   :.:....|.|||||.|.:.....|
Zfish     2 SETVKYVDDEHRTIFLKL---LNEQRLEGEHCDIAVVV---EDVKFRAHRCVLAACSNYFKKLFK 60

  Fly    69 QQQFSIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNL----- 128
            :.:....:.::|   :|..:.....::::.|...:||.|:.........|||.:..|..|     
Zfish    61 KHEVDSSSVIEI---DFIRSDIFEEVLNYMYTAKISVKKKDVNLMMSSGQILGIRFLDKLCSQKR 122

  Fly   129 -----------------YQLQPLGEAKEATEIPAPGEAQPNPD-PEKKAEAVFENRQSYFKL-KN 174
                             |.:..:|...|...:...|:.|...| .:..::.:.|..|...:| |:
Zfish   123 DMSPDEKNGDPRNAKFPYDMVKMGLPMEDPPLNQDGDVQVLGDQDDTPSDDIVEEAQGNHELDKS 187

  Fly   175 PR-------------AVKSSSKVNYCIGCDFKCYQVQKMIEHMGSCEPSHLICSLCEVGFLD--- 223
            |.             |.:...||.        ||..:  :|.:.. ||..|......:.|.|   
Zfish   188 PNNALQVQEAILKELAQEDVPKVG--------CYDQE--VEALDG-EPKELAAHTQTLSFADSMG 241

  Fly   224 ---------W------REYDTHLRRHSGDLRKPFFCLQCGIRFNTRAALLVHQPKHSTETPHICP 273
                     |      .:::..|..|    |....|..||..|.....|..|:..||.:.|.||.
Zfish   242 DVKDTQPPGWSTATADMKFEYLLYGH----RDQLACQVCGKTFIDENRLRKHEKLHSADRPFICE 302

  Fly   274 HCGKGFKWKQGLSNHILVHNPEKQMLCDVCGYSTTHMKALKSHKLLHTGEF-FACTVSGCKHRAN 337
            .|.|.|..:..|..|:.:|...|...|:.||.|......||.|:.:|:.|. |||.:  |:....
Zfish   303 ICSKAFTTQAHLKEHLKIHTGFKPYRCEACGKSFIRAPDLKKHERVHSNERPFACQM--CEKAFK 365

  Fly   338 RKENLKLHIETHKQGRDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKE 402
            .|.:||.|...|:..:.|:|..|...|:::.:||||     ||..:..: :|.| |..:|:..:.
Zfish   366 HKSHLKDHERRHRGEKPFVCNSCTKAFAKASDLKRH-----ENNMHSER-KLSG-SGLQSETEQL 423

  Fly   403 HVQRVHTEKPVQLE 416
            ....:..|...|||
Zfish   424 QAAAMAAEAEQQLE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 62/228 (27%)
C2H2 Zn finger 214..234 CDD:275368 4/37 (11%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
C2H2 Zn finger 387..408 CDD:275368 4/20 (20%)
zbtb14NP_998701.1 BTB 20..123 CDD:279045 26/108 (24%)
BTB 31..122 CDD:197585 20/96 (21%)
COG5048 <273..408 CDD:227381 46/141 (33%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
zf-C2H2 299..321 CDD:278523 7/21 (33%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
zf-H2C2_2 313..338 CDD:290200 8/24 (33%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 341..366 CDD:290200 9/26 (35%)
C2H2 Zn finger 357..377 CDD:275368 6/21 (29%)
zf-H2C2_2 369..393 CDD:290200 7/23 (30%)
C2H2 Zn finger 385..401 CDD:275368 5/15 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.