DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and Zbtb44

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_006242830.1 Gene:Zbtb44 / 363035 RGDID:1308984 Length:616 Species:Rattus norvegicus


Alignment Length:594 Identity:114/594 - (19%)
Similarity:189/594 - (31%) Gaps:208/594 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HSQTMQSIPTLHQPLHSKVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFINS-- 65
            |||.|              ...||..|..|.|||:.:.:  .|.: ...|..||||.|.|..:  
  Rat    13 HSQEM--------------LGKLNMLRNDGHFCDITIRV--QDRI-FRAHKVVLAACSDFFRTKL 60

  Fly    66 -----NQKQQQFSIHNPLKITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTEL 125
                 ::.:....:|:   :|:..|.      .::::.|...:|::.|:      :..:||....
  Rat    61 VGQTEDENKNVLDLHH---VTVTGFI------PLLEYAYTATLSINTEN------IIDVLAAASY 110

  Fly   126 LNLYQLQPLGEAKEATEIPAPGEA--QPNPDPEKKAEAVFEN----------------------- 165
            :.::.:     |...:|.......  .||..|||..:|..||                       
  Rat   111 MQMFSV-----ASTCSEFMKSSILWNTPNSQPEKGLDAGQENSSNCNFTSRDGSISPVSSECSAV 170

  Fly   166 -------------RQSYFKLKNPRAVKSSSKVN----------------------------YCIG 189
                         |:||..:.....||.|::.|                            :..|
  Rat   171 ERTIPVCRESRRKRKSYIVMSPESPVKCSTQTNSPQVLNSSASYAENRNQPVDSSLAFPWTFPFG 235

  Fly   190 CDFKCY-QVQKMIEHMGSCE---PS--------HLICSLCEVGFLDWREYDTHLR--RHSG---- 236
            .|.:.. :..|..|:..:.|   ||        ::.|...:.......|.|..::  |.|.    
  Rat   236 IDRRIQPEKAKQAENTRTLELPGPSEAGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH 300

  Fly   237 -DLRKPFFC-------------------------------------------LQCGIRFNTRA-- 255
             ::.:|...                                           ||.....|..|  
  Rat   301 EEVSQPVSASQSSLSDQQTVPGSEPVQEDLLISPQSSSIGSVDEGVTEGLPTLQSTSSTNAHADE 365

  Fly   256 -----------ALLVHQPKHSTE--------TPHICPHCGKGFKWKQGLSNHILVHNPEKQMLCD 301
                       .|.:.....|||        .|..||.||..|...|.|..|:|:|:..|...||
  Rat   366 DDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHSGIKPFQCD 430

  Fly   302 VCGYSTTHMKALKSHKLLHTGE-FFACTVSGCKHRANRKENLKLHIETH--KQGRDFICEVCGCK 363
            .||...|...:||.|:|.|.|: .|.|.:......:..:....:.:..|  ::.|.:.|:.||..
  Rat   431 CCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECKTCGAM 495

  Fly   364 FSQSKNLKRH--ALKHTENGPNRYKCQLCGFSSHRSDKMKEHVQRVHTEKPVQLELSE-TVDSSF 425
            |:.|.||..|  :|.|..:       :|..:.......:.:::.:...|..||.:|.| |.:|| 
  Rat   496 FTNSGNLIVHLRSLNHEAS-------ELANYFQSSDFLVPDYLSQEQEEALVQYDLGEHTSESS- 552

  Fly   426 PDDFELPVI 434
             ...::|||
  Rat   553 -SSVQMPVI 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 57/297 (19%)
C2H2 Zn finger 214..234 CDD:275368 3/21 (14%)
C2H2 Zn finger 244..264 CDD:275368 5/75 (7%)
C2H2 Zn finger 272..292 CDD:275368 9/19 (47%)
C2H2 Zn finger 300..320 CDD:275368 9/19 (47%)
C2H2 Zn finger 330..349 CDD:275368 0/18 (0%)
C2H2 Zn finger 357..377 CDD:275368 9/21 (43%)
C2H2 Zn finger 387..408 CDD:275368 1/20 (5%)
Zbtb44XP_006242830.1 BTB 21..125 CDD:279045 25/126 (20%)
BTB 32..128 CDD:197585 19/118 (16%)
COG5048 383..>449 CDD:227381 24/65 (37%)
zf-C2H2 399..421 CDD:278523 9/21 (43%)
C2H2 Zn finger 401..421 CDD:275368 9/19 (47%)
zf-H2C2_2 413..438 CDD:290200 9/24 (38%)
C2H2 Zn finger 429..449 CDD:275368 9/19 (47%)
C2H2 Zn finger 457..476 CDD:275368 1/18 (6%)
C2H2 Zn finger 489..511 CDD:275371 9/21 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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