DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plzf and Zfp143

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001012169.2 Gene:Zfp143 / 361627 RGDID:1305662 Length:638 Species:Rattus norvegicus


Alignment Length:275 Identity:78/275 - (28%)
Similarity:112/275 - (40%) Gaps:46/275 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 DPEKKAEAVFENRQSYFKLKNPRAVKSSSKVNYC--IGCDFKCYQVQKMIEHMGSCEPSHLICSL 216
            :.|||.:.|.   |.:.....|::.:|..|...|  .||. |.|..           ..||    
  Rat   209 EQEKKMQIVL---QGHATRVTPKSQQSGEKAFRCKYDGCG-KLYTT-----------AHHL---- 254

  Fly   217 CEVGFLDWREYDTHLRRHSGDLRKPFFCLQ--CGIRFNTRAALLVHQPKHSTETPHIC--PHCGK 277
                       ..|.|.|:||  :|:.|..  ||..|.|...|..|...|:.|.|:.|  .:|.|
  Rat   255 -----------KVHERSHTGD--RPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTK 306

  Fly   278 GFKWKQGLSNHILVHNPEKQMLCDV--CGYSTTHMKALKSHKLLHTGEF-FACTVSGCKHRANRK 339
            .||....|..||..|..|:...|.:  ||.|.|.....|.|...||||. :.||..||.......
  Rat   307 SFKTSGDLQKHIRTHTGERPFKCPIEGCGRSFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASA 371

  Fly   340 ENLKLHIETHKQGRDFICEVCGC--KFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHRSDKMKE 402
            .|.|.|:..|...:.::|.|.||  :|::..:|.:|.:.||.:.|  |.|..||.:..:...:..
  Rat   372 TNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKP--YNCNHCGKTYKQISTLAM 434

  Fly   403 HVQRVHTE-KPVQLE 416
            |.:..|.: :|::.|
  Rat   435 HKRTAHNDTEPIEEE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 63/218 (29%)
C2H2 Zn finger 214..234 CDD:275368 2/19 (11%)
C2H2 Zn finger 244..264 CDD:275368 7/21 (33%)
C2H2 Zn finger 272..292 CDD:275368 8/21 (38%)
C2H2 Zn finger 300..320 CDD:275368 7/21 (33%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 7/21 (33%)
C2H2 Zn finger 387..408 CDD:275368 4/20 (20%)
Zfp143NP_001012169.2 SFP1 <207..292 CDD:227516 28/114 (25%)
C2H2 Zn finger 239..261 CDD:275368 9/48 (19%)
COG5048 <251..424 CDD:227381 60/191 (31%)
C2H2 Zn finger 269..291 CDD:275368 7/21 (33%)
C2H2 Zn finger 299..321 CDD:275368 8/21 (38%)
C2H2 Zn finger 329..351 CDD:275368 7/21 (33%)
C2H2 Zn finger 359..381 CDD:275368 7/21 (33%)
C2H2 Zn finger 389..411 CDD:275368 7/21 (33%)
C2H2 Zn finger 419..438 CDD:275368 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.