DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and CG30431

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_610211.1 Gene:CG30431 / 35549 FlyBaseID:FBgn0050431 Length:418 Species:Drosophila melanogaster


Alignment Length:303 Identity:79/303 - (26%)
Similarity:107/303 - (35%) Gaps:72/303 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNLYQLQPLGEAKEATEIPAPGEAQPNPDP- 155
            |.|..::...:.|.|.....|..|.|::.||                   |.|.|.|:...|.| 
  Fly   153 HDIPSYWESSVDSGSLNTPHHQPETAELFAV-------------------EPPTPPESSEEPAPD 198

  Fly   156 --EKKAEAVFENRQSYFKLKNPRAVKSSSKV-----NYCIGCDFKCYQVQKMIEHM----GSCEP 209
              ||........||...|   |:..|:|..|     :.|..|:.|..:..::..||    |..|.
  Fly   199 AAEKPKMRRARPRQDNVK---PKERKASGAVHPRSLHPCPECEKKFTRNFQLKLHMTAVHGMGEM 260

  Fly   210 SHLICSLCEVGFLDWREYDTHLRR-HSGDLRKPFFCLQCGIRFNTRAALLVHQPKHSTET-PHI- 271
            .:. |..|...|........|::. ||.:  :||.|..|..||..|..||.|...|:.|. |.| 
  Fly   261 RYQ-CEECRKNFASRHSLRYHVKSVHSTE--RPFGCQHCDRRFILRTQLLSHLRTHTGEAKPRIF 322

  Fly   272 -CPHCGKGFKWKQGLSNHILVHNP--EKQMLCDVCGYSTTHMKALKSHKLLHTGEFFACTVSGCK 333
             |..|.|.:..|..|..|:..|||  |:...||.|..:......|.||.|:||||          
  Fly   323 ECQRCSKSWPTKSDLRTHMRSHNPNMERPFKCDRCSKAFFTRGHLNSHLLVHTGE---------- 377

  Fly   334 HRANRKENLKLHIETHKQGRDFICEVCGCKFSQSKNLKRHALK 376
                               :.|.||.|...:....||..|.::
  Fly   378 -------------------KPFACEYCDKCYQSVGNLNNHMVR 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 53/194 (27%)
C2H2 Zn finger 214..234 CDD:275368 4/20 (20%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..349 CDD:275368 0/18 (0%)
C2H2 Zn finger 357..377 CDD:275368 6/20 (30%)
C2H2 Zn finger 387..408 CDD:275368
CG30431NP_610211.1 zf-AD 11..82 CDD:285071
C2H2 Zn finger 234..255 CDD:275368 5/20 (25%)
C2H2 Zn finger 264..285 CDD:275368 4/20 (20%)
C2H2 Zn finger 293..313 CDD:275368 8/19 (42%)
zf-C2H2_8 305..373 CDD:292531 23/67 (34%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 366..389 CDD:290200 12/51 (24%)
C2H2 Zn finger 382..403 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453386
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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