DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and CG17612

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:435 Identity:103/435 - (23%)
Similarity:157/435 - (36%) Gaps:101/435 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 IVDFFYEDLVSVSKEHELHFREL-AQILAVTELLNLYQLQPLGEAKEATEIPAPGEAQPNPDPEK 157
            |.|...|:.:.|.||..:...:| .:...:||.|               |.||.|..:...:...
  Fly   146 IQDSVAEEELPVIKEEAIEGEDLQGEYFIITECL---------------EEPAIGSCRVCLEQSD 195

  Fly   158 KAEAVFENRQSY--------FKLKNPRAVKSSSKVNY-CIGC----------------------- 190
            ....:|::...|        .:.......|..|...| |:.|                       
  Fly   196 NLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDVVKNAFDDLESKENTIQMYRQ 260

  Fly   191 ------DFKCYQVQ-KMIEHMGSCEPSHLICSLCEVGFLDWREYDTHLRRHSGDLR--KP--FFC 244
                  |.....|: |.:::..:.:|.|. |..|...||...:...|:|.|: :.|  :|  ..|
  Fly   261 PKEEIIDIDSIPVKNKPVDYEVTGKPPHR-CPQCPKIFLLAAKLQAHIRTHN-ETRTTEPPRLKC 323

  Fly   245 LQCGIRFNTRAALLVHQPKH--------STETPHICPHCGKGFKWKQGLSNHILVHNPEKQML-- 299
            ..|...:..|..|..|...|        ..|.|:.||||.|.|.:...|..||..|....|.|  
  Fly   324 PMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLFLYSSFLEIHIQTHEDVSQRLSR 388

  Fly   300 -----CDVCGYSTTHMKALKSHKLLHTGE-FFACTVSGCKHRANRKENLKLHIETHKQGRDFICE 358
                 |..|....:.:.:||.|..:|.|| .|.|.:  |......:.|||.|...|.:   |.|.
  Fly   389 KSSHKCAQCADVFSDVSSLKDHVKIHAGERTFKCPL--CLMSFQEESNLKSHDCAHTR---FKCH 448

  Fly   359 VCGCKFSQSKN-LKRHALK-HTENGPNRYKCQLCGFSSHRSDKMKEHVQRVHTEKPVQLELSETV 421
            .|. ||.:|:| |..|..| ||..||  :||..|..:..:.:.:|||:.   ::..||...|::.
  Fly   449 KCS-KFFESQNYLDFHFKKSHTTKGP--FKCIKCQQTFQKRNGLKEHIS---SQVCVQFLRSKSP 507

  Fly   422 DSSFPDDFELPVIETSPK-KKPKSVKSKTIRNVNPDKRLKTLLPK 465
            ...||          .|| .|..|::.....:....|::||::.:
  Fly   508 GQIFP----------CPKCPKKFSIEDNYQMHHATHKKVKTVIER 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 67/232 (29%)
C2H2 Zn finger 214..234 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 5/19 (26%)
C2H2 Zn finger 272..292 CDD:275368 9/19 (47%)
C2H2 Zn finger 300..320 CDD:275368 5/19 (26%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 9/21 (43%)
C2H2 Zn finger 387..408 CDD:275368 5/20 (25%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 7/58 (12%)
C2H2 Zn finger 290..310 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275370 5/19 (26%)
zf-C2H2_8 356..438 CDD:292531 27/83 (33%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..438 CDD:275368 5/17 (29%)
C2H2 Zn finger 447..463 CDD:275368 7/16 (44%)
C2H2 Zn finger 476..505 CDD:275368 7/31 (23%)
C2H2 Zn finger 513..533 CDD:275368 4/19 (21%)
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 568..584 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446692
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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