DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and Zbtb38

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001012489.2 Gene:Zbtb38 / 315936 RGDID:1310136 Length:1203 Species:Rattus norvegicus


Alignment Length:375 Identity:83/375 - (22%)
Similarity:137/375 - (36%) Gaps:99/375 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 YQLQ----------------PLG--------------EAKEATEIPAPGEAQPNPDPEKKAEAVF 163
            ||:|                |||              |..:......|.....|..|:||::.:.
  Rat   860 YQMQEETLPRESDPETRGDSPLGLCQADCVEMSEAFDEVSDQDSTDKPWRPYYNYKPKKKSKQLR 924

  Fly   164 ENRQSYFKLKNPRAVKS---------------SSKVNYCIGCDFKCYQVQ----KMIEHMGSCEP 209
            :.|:  .|.:..|..:|               ..:..|....| :|.:|:    |..|...:.|.
  Rat   925 KIRK--VKWRKERGSRSPVGRRRYPAELDRAEMGRRRYPAELD-RCAEVKLPPDKASEEEENKEM 986

  Fly   210 SHLICSLCE------VGFLDWREYDTHLRRHSGDLRKPFFCLQCGIRFNTRAALLVHQPKHSTET 268
            ..|.|.||:      .|        ...:.|.....||:.|..|..:|.:.:.|.:|...|:.|.
  Rat   987 PKLQCELCDGDKAAGAG--------AEGKPHQHLTLKPYICELCAKQFQSSSTLKMHMRCHTGEK 1043

  Fly   269 PHICPHCGKGFKWKQGLSNHILVHNPEKQMLCDVCGYSTTHMKALKSHKLLHTGE-FFAC--TVS 330
            |:.|..||:.|..:..|..|..:|...|:.:|..|..:.|..:.||.|:.:|||| .:.|  ...
  Rat  1044 PYQCKTCGRRFSVQGNLQKHERIHLGVKEFICQYCNKAFTLNETLKIHERIHTGEKRYHCQFCFQ 1108

  Fly   331 GCKHRANRKENLKLHIETHKQGRDFICEVCG--CK------FSQSKNLKRHALKHTENGPNRYKC 387
            |..:.:.::.:.:.|:..| .|:.|.|..|.  ||      ..|.|:|.:...|..|..      
  Rat  1109 GFLYLSTKRNHERRHVREH-DGKGFACFQCPKICKTAAALRMHQKKHLFKTLTKQEETD------ 1166

  Fly   388 QLCGFSSHRSDKMKEHVQRVHTEKPVQLELSETVDSSFPDDFELPVIETS 437
            .||    |.:..:.|       .:|    .:::.||...||.:.|:::.|
  Rat  1167 DLC----HENSDLLE-------SQP----CTDSEDSDQKDDIKKPLLKMS 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 57/230 (25%)
C2H2 Zn finger 214..234 CDD:275368 4/25 (16%)
C2H2 Zn finger 244..264 CDD:275368 5/19 (26%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..349 CDD:275368 2/18 (11%)
C2H2 Zn finger 357..377 CDD:275368 7/27 (26%)
C2H2 Zn finger 387..408 CDD:275368 4/20 (20%)
Zbtb38NP_001012489.2 BTB_POZ_ZBTB38_CIBZ 15..128 CDD:349532
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..334
Interaction with CBFA2T3. /evidence=ECO:0000250|UniProtKB:Q8NAP3 299..522
zf-C2H2_8 308..401 CDD:406359
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 372..391 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..535 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..644
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 731..776
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..882 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..914 2/18 (11%)
C2H2 Zn finger 1019..1039 CDD:275368 5/19 (26%)
zf-H2C2_2 1032..1055 CDD:404364 8/22 (36%)
zf-C2H2 1045..1067 CDD:395048 6/21 (29%)
C2H2 Zn finger 1047..1067 CDD:275368 6/19 (32%)
C2H2 Zn finger 1075..1095 CDD:275368 6/19 (32%)
zf-H2C2_2 1088..1112 CDD:404364 9/23 (39%)
C2H2 Zn finger 1103..1123 CDD:275368 2/19 (11%)
C2H2 Zn finger 1134..1154 CDD:275368 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1172..1203 8/41 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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