DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plzf and Zbtb17

DIOPT Version :9

Sequence 1:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_038966007.1 Gene:Zbtb17 / 313666 RGDID:1307143 Length:819 Species:Rattus norvegicus


Alignment Length:545 Identity:122/545 - (22%)
Similarity:186/545 - (34%) Gaps:179/545 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PLHS-KVSNYLNNQRRTGQFCDLLLELDSDDSLSLSVHFCVLAAQSQFINSNQKQQQFSIHNPLK 79
            |.|| :|...||.||:.|..||....:|..|   ...|..||||.|::.......|:..:|    
  Rat     4 PQHSQRVLEQLNQQRQMGLLCDCTFVVDGVD---FKAHKAVLAACSEYFKMLFVDQKDVVH---- 61

  Fly    80 ITIRNFSCTQCLHTIVDFFYEDLVSVSKEHELHFRELAQILAVTELLNL-------YQLQPLGE- 136
            :.|.|   ...|..:::|.|...:.:|.|:      :..:|||...|.:       :.|:.|.| 
  Rat    62 LDISN---AAGLGQVLEFMYTAKLHLSPEN------VDDVLAVASFLQMQDIITACHTLKSLAEP 117

  Fly   137 ----------------------------------------------------------------- 136
                                                                             
  Rat   118 TSTTGESADASAEEGGDKRAKEEKAAATVLSRLDQARSSSSAGPGRELKEEWGGQAESASRGFVP 182

  Fly   137 ----------------------AKEATEIPAPGEAQP---NPDPEK-----KAEAVFENRQSYFK 171
                                  |::..:..||.|..|   .|||..     :|||:.|:.:...:
  Rat   183 AMEETHLTSAQSPNPASHPSSGAEQTEKADAPREPPPVELKPDPTSSMAAAEAEALSESSEQEME 247

  Fly   172 LK--------------NPRAVKSSSKVNYCIGCDFKCYQVQKMIEHMGSCEPSHLI--------- 213
            ::              .|..||..       |...:..:..:..|.....:..|.:         
  Rat   248 VEPASKGEEGQEEEGPGPATVKEE-------GVHLENGEPPEENEESAGTDSGHELGMEGQNLRS 305

  Fly   214 ------------------CSLCEVGFLDWREYDTHLRRHSGDLRKPFFCLQCGIRFNTRAALLVH 260
                              |..|...|.....:..|:|.|:|:  |||.|.:|...|:..||...|
  Rat   306 GTYGDRTESKAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGE--KPFSCRECSKAFSDPAACKAH 368

  Fly   261 QPKHSTETPHICPHCGKGFKWKQGLSNHILVHNPEKQMLCDVCGYSTTHMKALKSHKLLHTGEF- 324
            :..||...|:.|..|||.::....|:.|...|:.|.:..|..||...|....||.|:|:|:|:. 
  Rat   369 EKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKP 433

  Fly   325 FACTVSGCKHRANRKENLKL-HIETHKQGRDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQ 388
            :.|...|   |:......|: |:|||...::..|..|..||:|..|||.|...|..:||  .||:
  Rat   434 YQCDYCG---RSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGP--LKCR 493

  Fly   389 LCGFSSHRSDKMKEHVQRVHT-EKP 412
            .||.....|..:|.|: |:|: |||
  Rat   494 ECGKQFTTSGNLKRHL-RIHSGEKP 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 65/238 (27%)
C2H2 Zn finger 214..234 CDD:275368 5/19 (26%)
C2H2 Zn finger 244..264 CDD:275368 6/19 (32%)
C2H2 Zn finger 272..292 CDD:275368 6/19 (32%)
C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..349 CDD:275368 5/19 (26%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..408 CDD:275368 7/20 (35%)
Zbtb17XP_038966007.1 BTB_POZ_ZBTB17_MIZ1 2..113 CDD:349515 33/124 (27%)
COG5048 322..653 CDD:227381 69/204 (34%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 6/19 (32%)
C2H2 Zn finger 380..400 CDD:275368 6/19 (32%)
C2H2 Zn finger 408..428 CDD:275368 8/19 (42%)
C2H2 Zn finger 436..456 CDD:275368 6/22 (27%)
C2H2 Zn finger 464..484 CDD:275368 9/19 (47%)
C2H2 Zn finger 492..512 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 548..568 CDD:275368
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..651 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 165 1.000 Inparanoid score I4087
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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