DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom70 and ttc6

DIOPT Version :9

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:XP_009291126.1 Gene:ttc6 / 568208 ZFINID:ZDB-GENE-090429-2 Length:1760 Species:Danio rerio


Alignment Length:613 Identity:125/613 - (20%)
Similarity:223/613 - (36%) Gaps:167/613 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AKIEKQAISLDGTAPD--QELERNQKSAELGEKLSPLKEANNYKTEGNNCYRNGKYDEAIKFYDK 115
            |.:|:..:|.|....|  :.::....:|:|..:::.|.:|   .|||.|  ||            
Zfish   737 AALEENQLSQDEDKLDMCEVVDEGLSTADLEHEVAKLTQA---LTEGGN--RN------------ 784

  Fly   116 AIDKCPKEHRTDMAIFYQNRAASYEMLKKWSNVKEDCTASLEFNPRYAKAYYRRARAHEATKDMN 180
            |.|:|             .|.|.|..|.......||.:|::...|....||:.|...:....|..
Zfish   785 AFDRC-------------RRGALYIKLGYLEQALEDLSAAISLEPHLLDAYWHRHSIYLLRNDPV 836

  Fly   181 ECLDDVTATCILEMFQNNQ----TIMFADRVLKETGRLDAEKGMRNRVPVVPSACFVNTYTRSFI 241
            ..|||:..     :..||:    ..|....:.|:.|.             ...|.|  :||    
Zfish   837 RALDDLNV-----IVTNNKKHADAFMSRAEIYKQRGE-------------TTLALF--SYT---- 877

  Fly   242 ADPLQTMKVPAPKSDAPPKGFLRAHLAFLEEKYEEIIPACTEEIESSEAEAQYKVEALLMRGTFH 306
                |.:||   |.|.....|.||.   :.:|..||:.|..:..::...:.. :.:|:::.|..|
Zfish   878 ----QAIKV---KPDDAEIYFKRAK---MYDKMGEILLAMEDYAKTFTIDPT-RTDAMMLHGMHH 931

  Fly   307 LLCGSYVESQQDFDAIIANDYADPNLRAYAYIKRAALYIQLDQREKGIADFAEAERLNP------ 365
            .....:..|.:||..::..:..:...|.|    |..:|.:|...||.:.|.:.|..|||      
Zfish   932 FNSSKWTVSLEDFSLLLKQEPDNAIARTY----RGRIYSKLGHFEKSVEDLSLAVHLNPADWLAF 992

  Fly   366 -----------------------------ENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNH 401
                                         ||...:..|..:.:.|:..:.|:|:||..:.:..:.
Zfish   993 YHRGCLLREIMPHLALRDFSTSVLINDSAENWRAFLHRGMVYVTLQHWQQAIADFEAVIKLDRSA 1057

  Fly   402 AIAFVQKCYAEYRLSLLAGDQRRLESVMHTFQNAIERFPSCVECYSLTAQVLADQQQFTQAEEYY 466
            |:|.|..    ..:.:|..| |..|:: ..|.||::..|:.|:.|...|:...:....::|.:..
Zfish  1058 AVAHVNL----GMICMLKMD-RHYEAI-RRFNNALKADPTYVKAYVCRARAFYNVNNLSKAVKDL 1116

  Fly   467 KKAMVLAPTNPALIVHQ------------AIMVLQWRGDINLAVQL------------------- 500
            .:|:.|.|....|.:.:            |.:.:|:..::..|:.|                   
Zfish  1117 TRAIHLKPDAYDLYIMRGKFFYEMKCFDLAALCIQYAAEMKTALGLSAVQQAVIQSFLGNDANAI 1181

  Fly   501 --LNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLY----------AKSQAELVHVYS 553
              |.:|::..|...... .||...::..:.|.|||.|:|||.:          ||..||:.::  
Zfish  1182 VCLEQAVDTQPSPPHLI-LLGRTLMKEHRFTEAVETFKKALSFLGSTKAKLSPAKETAEVFYL-- 1243

  Fly   554 LRNAAVAQINVTKKLGIDMNSVSAMAQS 581
                 :....||::|....:..|.:.|:
Zfish  1244 -----IGVCYVTQRLLFQESGDSLLLQA 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 TPR_11 89..160 CDD:290150 17/70 (24%)
TPR repeat 90..118 CDD:276809 8/27 (30%)
TPR repeat 123..158 CDD:276809 7/34 (21%)
TPR repeat 296..324 CDD:276809 6/27 (22%)
TPR_11 333..399 CDD:290150 20/100 (20%)
TPR repeat 334..362 CDD:276809 8/27 (30%)
TPR repeat 367..397 CDD:276809 7/29 (24%)
TPR repeat 402..437 CDD:276809 10/34 (29%)
TPR_16 413..477 CDD:290168 15/63 (24%)
TPR repeat 443..471 CDD:276809 5/27 (19%)
TPR repeat 476..507 CDD:276809 7/63 (11%)
TPR_11 486..539 CDD:290150 14/73 (19%)
TPR repeat 512..539 CDD:276809 8/26 (31%)
ttc6XP_009291126.1 TPR_11 784..850 CDD:290150 20/95 (21%)
TPR repeat 784..814 CDD:276809 11/54 (20%)
TPR repeat 852..882 CDD:276809 8/52 (15%)
TPR 871..1146 CDD:223533 61/301 (20%)
TPR repeat 887..912 CDD:276809 7/27 (26%)
TPR repeat 922..946 CDD:276809 6/23 (26%)
TPR repeat 955..983 CDD:276809 9/31 (29%)
TPR repeat 988..1017 CDD:276809 0/28 (0%)
TPR repeat 1025..1052 CDD:276809 6/26 (23%)
TPR repeat 1057..1088 CDD:276809 10/36 (28%)
TPR repeat 1093..1120 CDD:276809 4/26 (15%)
TPR repeat 1127..1155 CDD:276809 3/27 (11%)
TPR_11 1154..1222 CDD:290150 14/68 (21%)
TPR repeat 1161..1189 CDD:276809 3/27 (11%)
TPR 1217..1486 CDD:223533 13/57 (23%)
TPR repeat 1238..1275 CDD:276809 7/36 (19%)
TPR repeat 1281..1308 CDD:276809
TPR repeat 1314..1342 CDD:276809
TPR repeat 1347..1377 CDD:276809
TPR repeat 1382..1405 CDD:276809
TPR repeat 1418..1448 CDD:276809
TPR 1432..1721 CDD:223533
TPR_2 1453..1484 CDD:285020
TPR repeat 1453..1481 CDD:276809
TPR repeat 1487..1517 CDD:276809
TPR repeat 1526..1552 CDD:276809
TPR repeat 1560..1586 CDD:276809
TPR repeat 1593..1620 CDD:276809
TPR 1626..1659 CDD:197478
TPR repeat 1626..1654 CDD:276809
TPR repeat 1659..1689 CDD:276809
TPR_11 1693..1757 CDD:290150
TPR repeat 1694..1721 CDD:276809
TPR repeat 1728..1756 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303136at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.