DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom70 and Stip1

DIOPT Version :10

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster


Alignment Length:584 Identity:106/584 - (18%)
Similarity:199/584 - (34%) Gaps:188/584 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LKEANNYKTEGNNCYRNGKYDEAIKFYDKAIDKCPKEHRTDMAIFYQNRAASYEMLKKWSNVKED 151
            :.:.|..|.:||......|:|||:..|.:||....:.|     :.|.||:|::....|:....||
  Fly     1 MDKVNELKEKGNQALSAEKFDEAVAAYTEAIALDDQNH-----VLYSNRSAAFAKAGKFQEALED 60

  Fly   152 CTASLEFNPRYAKAYYRRARAHEATKDM-------NECLD-DVTATCILEMFQNNQTIMFADRVL 208
            ...:::.||.:.|.|.|:..|.....|.       ||.|. |.|...:|:  ...:|...|...:
  Fly    61 AEKTIQLNPTWPKGYSRKGAAAAGLNDFMKAFEAYNEGLKYDPTNAILLQ--GRMETTASALSFM 123

  Fly   209 KETGRL----DAEKGMRNRVPVVPSACFVNTYTRSFIADPLQTMKVPAPK-----SDAPPKGFLR 264
            :..|.:    |.::....|.|..|.            |.|.:..|...|:     .:...|.|.|
  Fly   124 QSQGDIPMDVDPQQARSRRAPSPPP------------AKPAEPPKPAEPRVEDMTEEQKNKYFAR 176

  Fly   265 ---------------------------------------AHLAFLEEKYEEIIPACTEEIE-SSE 289
                                                   |.:.|..::|||.|..|.:.|| ..|
  Fly   177 KEKELGNAAYKKKDFETALKHYHAAIEHDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRE 241

  Fly   290 AEAQYKV--EALLMRGTFHLLCGSYVESQQDFDAIIANDYADPNLRA--------------YAYI 338
            :.|.:|:  ::....|..:....:|.:::..::..: :::..|.::.              .|||
  Fly   242 SRADFKLIAKSFARIGNTYRKLENYKQAKVYYEKAM-SEHRTPEIKTSLSEVEAKIKEEERMAYI 305

  Fly   339 ---------KRAALYIQLDQREKGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKA 394
                     ::..|:.:.......:..:.||.:.||::|.:|..||.....|...:..|.:.:..
  Fly   306 NPEKAEEEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDPKLYSNRAACYTKLAAFDLGLKDCDTC 370

  Fly   395 VSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHTFQNAIERFPSCVECYSLTAQVLADQQQF 459
            :.:.                                      |:|   ::.|....::|...||.
  Fly   371 IKLD--------------------------------------EKF---IKGYIRKGKILQGMQQQ 394

  Fly   460 TQAEEYYKKAMVLAPTNPALIVHQAIMVLQWRGDINLAVQLLNKAIEVDPKCELAYETLGTVEVQ 524
            ::|:..|:||:.|.|.|.                         :|||...:|.:.:        |
  Fly   395 SKAQAAYQKALELDPNNA-------------------------EAIEGYRQCSMNF--------Q 426

  Fly   525 RAQLTRAVELFEKALLYAKSQAELVHVYSLRNAAVAQINVTKKLGIDMNSVSAMAQSGLMAQGV 588
            |..        ::.|..|.|..|:..:  |::.|:..|  .:::..|.|:|....|:..:|..:
  Fly   427 RNP--------QEVLKNAMSDPEIQQI--LKDPAMRMI--LEQMQSDPNAVKEHLQNPAIADKI 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 3a0801s09 42..567 CDD:273380 101/561 (18%)
TPR repeat 90..118 CDD:276809 10/27 (37%)
TPR repeat 123..158 CDD:276809 8/34 (24%)
TPR repeat 296..324 CDD:276809 2/29 (7%)
TPR repeat 334..362 CDD:276809 6/50 (12%)
TPR repeat 367..397 CDD:276809 6/29 (21%)
TPR repeat 402..437 CDD:276809 0/34 (0%)
TPR repeat 443..471 CDD:276809 8/27 (30%)
TPR repeat 476..507 CDD:276809 3/30 (10%)
TPR repeat 512..539 CDD:276809 2/26 (8%)
Stip1NP_477354.1 TPR repeat 7..32 CDD:276809 9/24 (38%)
TPR 10..276 CDD:440225 58/284 (20%)
TPR repeat 37..67 CDD:276809 8/34 (24%)
TPR repeat 72..100 CDD:276809 7/27 (26%)
LapB 173..415 CDD:442196 44/308 (14%)
TPR repeat 175..203 CDD:276809 1/27 (4%)
TPR repeat 208..238 CDD:276809 8/29 (28%)
TPR repeat 250..278 CDD:276809 2/28 (7%)
TPR repeat 310..338 CDD:276809 3/27 (11%)
TPR repeat 343..373 CDD:276809 6/29 (21%)
TPR repeat 378..406 CDD:276809 8/27 (30%)
STI1 429..482 CDD:436075 12/62 (19%)

Return to query results.
Submit another query.