DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom70 and Tomm70

DIOPT Version :9

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_997684.1 Gene:Tomm70 / 304017 RGDID:1303049 Length:610 Species:Rattus norvegicus


Alignment Length:591 Identity:235/591 - (39%)
Similarity:353/591 - (59%) Gaps:48/591 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GSMKLTKWQLALILGTPLAIGLGTYAVKSWT-------------AASKELDGEKKRPKAKIEKQA 59
            |:..|.:|.:||.:|.||.:|.|  |:..|:             |:..:.:.|:|.|    |.:|
  Rat    35 GAGTLPRWHVALAIGAPLLLGAG--AMYLWSRRRRRREAGGRGDASGLKRNSERKTP----EGRA 93

  Fly    60 ISLDGTAPD---QELERNQKSAELGEKLSPLKEANNYKTEGNNCYRNGKYDEAIKFYDKAIDKCP 121
            ....|:.||   ..||           :|.|..|...|.:||..::.|||::||:.|.:||..||
  Rat    94 SPALGSGPDGSGDSLE-----------MSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCP 147

  Fly   122 KEHRTDMAIFYQNRAASYEMLKKWSNVKEDCTASLEFNPRYAKAYYRRARAHEATKDMNECLDDV 186
            .|...|::.|||||||::|.|:||..|.:|||.::|.||:|.||.:|||:|||...:..|||:||
  Rat   148 TEKNADLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDV 212

  Fly   187 TATCILEMFQNNQTIMFADRVLKETGRLDAEKGMRNRVPVVPSACFVNTYTRSFIADPLQTMKVP 251
            ||.||||.|||.|:::.||:|||..|:.:|::..:||.|::||..|:.:|..||..|.:....:.
  Rat   213 TAVCILEGFQNEQSMLLADKVLKLLGKENAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPMLK 277

  Fly   252 APKSDAPP------------KGFLRAHLAFLEEKYEEIIPACTEEIESSEAEAQYKVEALLMRGT 304
            ..|||...            .|:|:|.....||.|::||..|::||   :|:.:|..||||:|.|
  Rat   278 GEKSDEDKDKEGEALEVKENSGYLKAKQYMEEENYDKIISECSKEI---DAQGKYMAEALLLRAT 339

  Fly   305 FHLLCGSYVESQQDFDAIIANDYADPNLRAYAYIKRAALYIQLDQREKGIADFAEAERLNPENPD 369
            |:||.||...::.|.|.:|:...|:..|||.|.|||..:.:|..|......||..|..::|.|.|
  Rat   340 FYLLIGSANAAKPDLDKVISLKEANVKLRANALIKRGTMCMQQQQPMLSTQDFNMAAEIDPMNSD 404

  Fly   370 VYHQRAQILLLLEQIEPALAEFEKAVSIAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHTFQN 434
            |||.|.|:.:||:.:|.|:|:|:..:.:.|..|:|..|||:|.||.:..|.:..::::.|..|:.
  Rat   405 VYHHRGQLKILLDLVEEAVADFDACIRLRPKFALAQAQKCFALYRQAYTANNSSQVQAAMKGFEE 469

  Fly   435 AIERFPSCVECYSLTAQVLADQQQFTQAEEYYKKAMVLAPTNPALIVHQAIMVLQWRGDINLAVQ 499
            .|::||.|.|.|:|.||.|.|||||.:|:|.|.|.:.|.|.|....||:.::.|||:.|::..::
  Rat   470 VIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDKGLE 534

  Fly   500 LLNKAIEVDPKCELAYETLGTVEVQRAQLTRAVELFEKALLYAKSQAELVHVYSLRNAAVAQINV 564
            |::||||:|.||:.||||:||:||||..:.:|:::|.||:..|||:.|:.|:|||.:||.||..|
  Rat   535 LISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEV 599

  Fly   565 TKKLGI 570
            .||.|:
  Rat   600 AKKYGL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 TPR_11 89..160 CDD:290150 32/70 (46%)
TPR repeat 90..118 CDD:276809 11/27 (41%)
TPR repeat 123..158 CDD:276809 17/34 (50%)
TPR repeat 296..324 CDD:276809 13/27 (48%)
TPR_11 333..399 CDD:290150 25/65 (38%)
TPR repeat 334..362 CDD:276809 10/27 (37%)
TPR repeat 367..397 CDD:276809 13/29 (45%)
TPR repeat 402..437 CDD:276809 11/34 (32%)
TPR_16 413..477 CDD:290168 26/63 (41%)
TPR repeat 443..471 CDD:276809 15/27 (56%)
TPR repeat 476..507 CDD:276809 11/30 (37%)
TPR_11 486..539 CDD:290150 25/52 (48%)
TPR repeat 512..539 CDD:276809 13/26 (50%)
Tomm70NP_997684.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..109 9/43 (21%)
3a0801s09 <116..603 CDD:273380 208/489 (43%)
TPR 1 116..149 14/32 (44%)
TPR repeat 116..144 CDD:276809 11/27 (41%)
TPR repeat 149..184 CDD:276809 17/34 (50%)
TPR 2 155..188 18/32 (56%)
TPR 3 296..329 12/35 (34%)
TPR 4 331..364 14/32 (44%)
TPR repeat 331..359 CDD:276809 13/27 (48%)
TPR repeat 364..398 CDD:276809 12/33 (36%)
TPR 5 369..402 11/32 (34%)
TPR 6 403..436 13/32 (41%)
TPR repeat 403..431 CDD:276809 12/27 (44%)
TPR 7 444..477 10/32 (31%)
TPR repeat 446..472 CDD:276809 6/25 (24%)
TPR 8 478..511 17/32 (53%)
TPR repeat 478..506 CDD:276809 15/27 (56%)
TPR repeat 511..542 CDD:276809 11/30 (37%)
TPR 9 513..546 12/32 (38%)
TPR 10 547..580 16/32 (50%)
TPR repeat 547..574 CDD:276809 13/26 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337325
Domainoid 1 1.000 182 1.000 Domainoid score I3375
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40112
Inparanoid 1 1.050 437 1.000 Inparanoid score I1630
OMA 1 1.010 - - QHG59169
OrthoDB 1 1.010 - - D303136at2759
OrthoFinder 1 1.000 - - FOG0004725
OrthoInspector 1 1.000 - - oto98644
orthoMCL 1 0.900 - - OOG6_104251
Panther 1 1.100 - - LDO PTHR46208
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5061
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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