DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom70 and tomm-70

DIOPT Version :9

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_498932.3 Gene:tomm-70 / 176228 WormBaseID:WBGene00022722 Length:554 Species:Caenorhabditis elegans


Alignment Length:562 Identity:120/562 - (21%)
Similarity:199/562 - (35%) Gaps:146/562 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KEANNYKTEGNNCYRNGKYDEAIKFYDKAIDKC-PKEHRTDMAIFYQNRAASYEML-KKWSNVKE 150
            ::....|..||..::..:||.|::.:.|.::|. |......:|:.||||||..|.: ....::..
 Worm    42 RDLEEIKALGNLKFKEKQYDSALEAFTKGVEKAGPNSSDQIVAMLYQNRAACREKVGHSPFDILN 106

  Fly   151 DCTASLEFNPRYAKAYYRRARAHEATKDMNECLDDVTATCILEMFQNNQTIMFADRVLKETGRLD 215
            ||.|:|:.:.:|.|||.|.|:|........:.|..:.|...|:...|.....|..::|......|
 Worm   107 DCMAALKVDKKYTKAYLRAAKALNDVGKKQDALAYLLAAFTLDSSLNKTNFEFFGKLLAIEPMSD 171

  Fly   216 AEKGMRNRVPVV---PSACF-VNTYTRSFIADPLQTMKVPAPKSD-----APPKGFLRAHLAFLE 271
            ...|...::..|   |.|.| :..:..::  |.|...|....:.:     ...|.:..|...|.:
 Worm   172 CHIGKPLKIEDVKPQPVALFRIQQWCDTW--DILDLFKTDLTRFEPEVLSEDQKQYQLALEKFKK 234

  Fly   272 EKYEEIIPACTEE-------------------------------------IESSEAEAQYKVEAL 299
            .||||:|...|||                                     |.|.|.|.:.|    
 Worm   235 GKYEELIDLLTEENSYPPAMILRGKMLSYSTDPNEATRYIDKVGAKINELIGSEEDEERKK---- 295

  Fly   300 LMRGTFHLLCGSYVESQQDFDAIIANDYADPNLRAYAYIKRAALYIQ----LD-----QREKGIA 355
            |||..|.:|....:.:..|.|..:.:...|...|.:.....|::::.    ||     ..::.:|
 Worm   296 LMRDAFDILKIELMYTMADLDKFLESVPKDDKERLFKLYSFASIFVYNGCVLDTAVTNHEQQMMA 360

  Fly   356 DFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVSIAPNHA--IAFVQKCYAE-YRLSL 417
            |...|.||                        |.|.||..::.|:.:  :.|::.|.:| |    
 Worm   361 DTNNANRL------------------------LTEAEKNGTLTPHLSMIVTFLKLCTSEDY---- 397

  Fly   418 LAGDQRRLESVMHTFQNAIERFPSCVECYSLTAQVLADQQQFTQAEEYYKKAM---------VLA 473
             |...||:..:....::....|         ...:::.....|..||..||.:         .|.
 Worm   398 -ADVHRRIREMEELAESRSTHF---------NLVLMSKVYMMTNNEESSKKLLEEAARITTRYLV 452

  Fly   474 PT----NPALIVHQAIMVLQWRGDINLAVQLLNKAIEVDPKCELAY--ETLGT----VEVQRAQL 528
            |:    ...|.||:     .....:.|..:..|.||.|||....|:  ..|||    ..:::...
 Worm   453 PSRHLQTADLHVHK-----PEAERLRLTTESANAAIAVDPFNFSAHVLHLLGTNGPEPMIKKENY 512

  Fly   529 TRAVELFEKALLYA------------------KSQAELVHVY 552
            .||:|....|.|:|                  |..||::.:|
 Worm   513 ERAMESIRNAALFAPPRELLMLKRMIPLMNAKKRAAEMLDMY 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 TPR_11 89..160 CDD:290150 21/72 (29%)
TPR repeat 90..118 CDD:276809 7/27 (26%)
TPR repeat 123..158 CDD:276809 12/35 (34%)
TPR repeat 296..324 CDD:276809 7/27 (26%)
TPR_11 333..399 CDD:290150 13/74 (18%)
TPR repeat 334..362 CDD:276809 6/36 (17%)
TPR repeat 367..397 CDD:276809 4/29 (14%)
TPR repeat 402..437 CDD:276809 7/37 (19%)
TPR_16 413..477 CDD:290168 12/76 (16%)
TPR repeat 443..471 CDD:276809 5/36 (14%)
TPR repeat 476..507 CDD:276809 7/30 (23%)
TPR_11 486..539 CDD:290150 14/58 (24%)
TPR repeat 512..539 CDD:276809 7/32 (22%)
tomm-70NP_498932.3 TPR_11 45..116 CDD:290150 21/70 (30%)
TPR repeat 45..72 CDD:276809 7/26 (27%)
TPR repeat 77..114 CDD:276809 12/36 (33%)
TPR repeat 119..145 CDD:276809 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46208
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.