DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom70 and ttc-1

DIOPT Version :9

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_492795.1 Gene:ttc-1 / 172965 WormBaseID:WBGene00016390 Length:207 Species:Caenorhabditis elegans


Alignment Length:143 Identity:42/143 - (29%)
Similarity:62/143 - (43%) Gaps:17/143 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LKEANNYKTEGNNCYRNGKYDEAIKFYDKAIDKCPKEHRTDMAIFYQNRAASYEMLKKWSNVKED 151
            :.:.::.|.||||.:.||::::|.:.|.:||..||.......:|...|.||:...|:||.:..|.
 Worm    15 ITKVDSLKKEGNNFFANGEFEKANEKYQEAIASCPPTSTEVQSILLSNSAAALIKLRKWESAVEA 79

  Fly   152 CTASLEFNPRYAKAYYRRARAH-----------EATKDMNECLD------DVTATCILEMFQNNQ 199
            .:.|:|......||..|||.|:           |..|.:.|.|.      |.....|.|...|..
 Worm    80 ASKSIEIGATNEKALERRAFAYSNMSEKYENSIEDYKQLQESLPKRRVELDRKIAEINEKINNRN 144

  Fly   200 TIMFADRVLKETG 212
            ..|.||.:.|..|
 Worm   145 EAMKADVMEKLKG 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 TPR_11 89..160 CDD:290150 23/70 (33%)
TPR repeat 90..118 CDD:276809 10/27 (37%)
TPR repeat 123..158 CDD:276809 9/34 (26%)
TPR repeat 296..324 CDD:276809
TPR_11 333..399 CDD:290150
TPR repeat 334..362 CDD:276809
TPR repeat 367..397 CDD:276809
TPR repeat 402..437 CDD:276809
TPR_16 413..477 CDD:290168
TPR repeat 443..471 CDD:276809
TPR repeat 476..507 CDD:276809
TPR_11 486..539 CDD:290150
TPR repeat 512..539 CDD:276809
ttc-1NP_492795.1 TPR repeat 18..46 CDD:276809 10/27 (37%)
3a0801s09 <20..>115 CDD:273380 30/94 (32%)
TPR repeat 56..86 CDD:276809 9/29 (31%)
TPR repeat 91..120 CDD:276809 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594913at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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