DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tom70 and spag1

DIOPT Version :9

Sequence 1:NP_609536.1 Gene:Tom70 / 34618 FlyBaseID:FBgn0032397 Length:589 Species:Drosophila melanogaster
Sequence 2:NP_001361690.1 Gene:spag1 / 100038144 XenbaseID:XB-GENE-853609 Length:915 Species:Xenopus tropicalis


Alignment Length:629 Identity:134/629 - (21%)
Similarity:226/629 - (35%) Gaps:181/629 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AVKSWTA-------ASKELDG-EKKRP-------KAKIEKQAISLDGTAPDQELERNQKSAELGE 82
            :::|:|:       ..||..| .||.|       |..:||:...::    |....:.|....:..
 Frog   125 SIRSYTSLPADNKQRGKERTGLSKKAPRDYRDWDKFDVEKELSKIE----DNPETKQQSKTTINP 185

  Fly    83 KLSPLKE---------------ANNYKTEGNNCYRNGKYDEAIKFYDKAIDKCPKEHRTDMAIFY 132
            |.|.:|:               |.|.|.:||..:|:|.|.|||.:|.::|...|.      |..|
 Frog   186 KTSAIKKTLDTAGLSPTQRRFIAENEKEKGNEAFRSGDYQEAIVYYSRSISVFPS------AAAY 244

  Fly   133 QNRAASYEMLKKWSNVKEDCTASLEFNPRYAKAYYRRARAHE-------ATKDMNECL----DDV 186
            .|||.:...|..|.....||...||.:|...|||.|||.||:       ||.|:|..|    |:.
 Frog   245 NNRAQAEIKLSNWRKALNDCERVLELDPGNTKAYLRRATAHKNLANYKAATTDLNRVLSQEPDNP 309

  Fly   187 TATCILEMFQNNQTIMFADRVLKETGRL-------------------------DAEKGMRNRVPV 226
            .|.  .|..:..:.:..|:...:..||.                         .::.|..:..|.
 Frog   310 VAK--KEFAEVEELLQKAEEASRCKGRKIVIEDIEGSDEDEAGVSVGGEPAGEHSDMGNAHNKPF 372

  Fly   227 ----VPSA--CFVNTYTRSFI---------------ADPLQTMKVPAPKSDAPPKGFLRAHLAFL 270
                .|.:  |...::|::.:               .|.|:..:||.|.::...|          
 Frog   373 PKKNCPRSEECGAPSHTQNGVKKDCGNGQQPRKPCEGDSLKQNRVPIPGTENTAK---------- 427

  Fly   271 EEKYEEIIPACTEEIESSEAEAQYKVEA--LLMRGTFHLLCGSYVESQQDFDAIIANDYADPNLR 333
             .:.:|:.|:.    |.....|:.|.|.  |...|.|......|.|:.::    :.|..:: |..
 Frog   428 -SEIKEVKPSS----EPLPTAARLKSEGNQLFKNGQFAEAALKYSEAIEN----VKNTRSE-NAE 482

  Fly   334 AYAYI--KRAALYIQLDQREKGIADFAEAERLNPENPDVYHQRAQILLLLEQIEPALAEFEKAVS 396
            ..|.:  .|||.:::.....:.|.|...|..|.|.:.....:||.....||:..||         
 Frog   483 ELAILHSNRAACHLKDGNSRECIEDCNRALELQPFSVKPLLRRAMANESLERYRPA--------- 538

  Fly   397 IAPNHAIAFVQKCYAEYRLSLLAGDQRRLESVMHTFQNAIERFPSCVECYSLTAQVLADQQQFTQ 461
                         |.:|:..|      :::|.|....::|.|.          .:.|.:|    .
 Frog   539 -------------YVDYKTVL------QIDSSMQVAHDSINRI----------TRTLIEQ----D 570

  Fly   462 AEEYYKKAMVLAPTNPALIVHQAIMVLQWRGDINLAVQLLNKAIEVDPKC--EL--AYETLGTVE 522
            ..::.:|...: ||.| :.||     ||..|.:..:.....|.:....|.  |:  |.:|.|...
 Frog   571 GPDWREKLPPI-PTVP-ISVH-----LQQHGGVPASSSSQPKILVEHGKSPEEMLQALKTEGNEC 628

  Fly   523 VQRAQLTRAVELFEKALLYAKSQAELVHVYSLRNAAVAQINVTK 566
            |::.|...|.:.:.:.|   |..||...:|:  |.|:..:.:::
 Frog   629 VKKGQYREAEKKYSECL---KINAEECTLYT--NRALCYLKLSE 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom70NP_609536.1 TPR_11 89..160 CDD:290150 25/85 (29%)
TPR repeat 90..118 CDD:276809 12/27 (44%)
TPR repeat 123..158 CDD:276809 10/34 (29%)
TPR repeat 296..324 CDD:276809 6/29 (21%)
TPR_11 333..399 CDD:290150 15/67 (22%)
TPR repeat 334..362 CDD:276809 7/29 (24%)
TPR repeat 367..397 CDD:276809 6/29 (21%)
TPR repeat 402..437 CDD:276809 5/34 (15%)
TPR_16 413..477 CDD:290168 11/63 (17%)
TPR repeat 443..471 CDD:276809 3/27 (11%)
TPR repeat 476..507 CDD:276809 7/30 (23%)
TPR_11 486..539 CDD:290150 12/56 (21%)
TPR repeat 512..539 CDD:276809 7/28 (25%)
spag1NP_001361690.1 3a0801s09 137..>550 CDD:273380 101/472 (21%)
TPR repeat 208..236 CDD:276809 12/27 (44%)
TPR repeat 240..270 CDD:276809 10/35 (29%)
TPR repeat 275..303 CDD:276809 12/27 (44%)
3a0801s09 <443..>717 CDD:273380 59/284 (21%)
TPR repeat 443..471 CDD:276809 8/27 (30%)
TPR repeat 484..514 CDD:276809 7/29 (24%)
TPR repeat 519..547 CDD:276809 9/55 (16%)
TPR repeat 619..646 CDD:276809 7/29 (24%)
TPR repeat 651..681 CDD:276809 3/19 (16%)
TPR repeat 686..714 CDD:276809
RPAP3_C 789..879 CDD:372776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1535
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.