DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr81 and nsmaf

DIOPT Version :9

Sequence 1:NP_609535.1 Gene:Wdr81 / 34616 FlyBaseID:FBgn0032395 Length:1953 Species:Drosophila melanogaster
Sequence 2:XP_003199050.1 Gene:nsmaf / 550506 ZFINID:ZDB-GENE-050417-342 Length:911 Species:Danio rerio


Alignment Length:656 Identity:160/656 - (24%)
Similarity:241/656 - (36%) Gaps:221/656 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 QPQSRVYPLPRISGDAPSSELPL---SYSQAVSFVAHSNF------------KQLW---EE---A 122
            :|...|.|:.:|         ||   |...||...||:.|            ||::   ||   |
Zfish    59 EPDDAVKPILKI---------PLKDCSEIAAVEETAHNPFIESKPACIVIKTKQIYQIKEENVVA 114

  Fly   123 YRKYNGAHVRMCRSTPSAPSTKPPSGQGQLQPHDVVLKELIQRVYRCPVLHCQLDRDGV------ 181
            ..||:....::.....|...|:           |||  :::.:::|...|..|.|:..:      
Zfish   115 PYKYDRGEKKITFQLGSPIKTE-----------DVV--QILLQLHRASRLDKQSDQTAMIAAILQ 166

  Fly   182 ----------SDSSNATSCSAGSCHANVLPALVAIETSTHISVFFYPPALECSLYDCITFSPALL 236
                      :...|.|......|.|.::..||.  .:.|:.:      .:|:||    |.|.  
Zfish   167 SRLARTRFDKNSFQNVTELPHMECEAEMVSPLVT--NAGHVCI------TDCNLY----FQPL-- 217

  Fly   237 GKNYNKTLFVI--YQILQLAKHLQGQGLFLGDLRLQ----------DIVL-------RENLWLQV 282
             .:|..::..|  :.:.::.|...|    |..|.|:          ||.|       |:.|:..:
Zfish   218 -NSYPDSVVQIGLHSVRRIYKRRHG----LRPLGLEVFCTENDLCSDIYLKFYKTKDRDELYYYI 277

  Fly   283 LPRLQCNLLDDDPAGEDMSPLTPLVSEDLGEAREAQQALPSSSTMFDLRFAYDPAHFNLREYTEM 347
            ...|:.:                 |:|...|:                             |...
Zfish   278 ATFLENH-----------------VAEHTAES-----------------------------YMLQ 296

  Fly   348 WCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWV-TDFSGR-----GGGAWRDLTKSKYRLNKG 406
            |..|.:||:.||..|||...||:.:.:.:.:.||| :|:|..     ...::|||:|....|||.
Zfish   297 WQRGHISNYQYLLHLNNLADRSVNDLSQYPVFPWVISDYSSTQLDLLNPASFRDLSKPIGALNKE 361

  Fly   407 DVHLDL-MYAHASQHGSADGSYQAIGDQAPHHVSDFLSEITYFVYMARRTPQSILCAH------- 463
            .:...| .|....:.....||:.:    :|.:|         ..|:.|..|:.:||..       
Zfish   362 RLERLLERYRDMPEPRFMYGSHYS----SPGYV---------LFYLVRVAPEHMLCLQNGRFDHA 413

  Fly   464 ------VRPIWVPAEYPVSIQRLQEWTPD--ECIPEFY-SDPMIFKS-IHEDL---------PDL 509
                  :...|         :...|...|  |.||||| ||....:: :..||         .::
Zfish   414 DRMFNSIGETW---------KNCLEGGTDFKELIPEFYGSDSSFLRNLLGLDLGRRQGGGRVENV 469

  Fly   510 ELPAWATCPEDFICKHREALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNV-----------CL 563
            |||.||:.|:||:.|...|||||||||.||.||||.||||..|..||.|.||           |.
Zfish   470 ELPPWASDPDDFLQKMCLALESQYVSEHLHEWIDLIFGYKQRGSEAVASHNVFHPLTYEGGVDCD 534

  Fly   564 TLVDQHRNLSQRGIV--------QLFASAHPPRRYATPWFSR--TAPRLSQLYASPAKRLAKSTE 618
            ::.|..:.::....:        |||.:.||.|  .||.|..  |.|.||....||.....:|.|
Zfish   535 SIEDPDQKIAMLTQILEFGQTPRQLFVTPHPQR--ITPRFYNLSTTPSLSSSELSPVSPCMESFE 597

  Fly   619 NLQAES 624
            :|..||
Zfish   598 DLTEES 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr81NP_609535.1 Beach 345..588 CDD:100117 88/294 (30%)
WD40 <1644..1877 CDD:225201
WD40 1651..1876 CDD:295369
WD40 repeat 1662..1705 CDD:293791
WD40 repeat 1710..1744 CDD:293791
WD40 repeat 1752..1788 CDD:293791
WD40 repeat 1799..1836 CDD:293791
nsmafXP_003199050.1 PH-like 184..277 CDD:302622 22/111 (20%)
Beach 296..567 CDD:280327 88/292 (30%)
WD40 <610..910 CDD:225201
WD40 620..908 CDD:238121
WD40 repeat 627..663 CDD:293791
WD40 repeat 669..705 CDD:293791
WD40 repeat 710..754 CDD:293791
WD40 repeat 760..795 CDD:293791
WD40 repeat 801..837 CDD:293791
WD40 repeat 883..907 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1786
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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