DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr81 and nsmaf

DIOPT Version :10

Sequence 1:NP_609535.1 Gene:Wdr81 / 34616 FlyBaseID:FBgn0032395 Length:1953 Species:Drosophila melanogaster
Sequence 2:XP_003199050.1 Gene:nsmaf / 550506 ZFINID:ZDB-GENE-050417-342 Length:911 Species:Danio rerio


Alignment Length:656 Identity:160/656 - (24%)
Similarity:241/656 - (36%) Gaps:221/656 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 QPQSRVYPLPRISGDAPSSELPL---SYSQAVSFVAHSNF------------KQLW---EE---A 122
            :|...|.|:.:|         ||   |...||...||:.|            ||::   ||   |
Zfish    59 EPDDAVKPILKI---------PLKDCSEIAAVEETAHNPFIESKPACIVIKTKQIYQIKEENVVA 114

  Fly   123 YRKYNGAHVRMCRSTPSAPSTKPPSGQGQLQPHDVVLKELIQRVYRCPVLHCQLDRDGV------ 181
            ..||:....::.....|...|:           |||  :::.:::|...|..|.|:..:      
Zfish   115 PYKYDRGEKKITFQLGSPIKTE-----------DVV--QILLQLHRASRLDKQSDQTAMIAAILQ 166

  Fly   182 ----------SDSSNATSCSAGSCHANVLPALVAIETSTHISVFFYPPALECSLYDCITFSPALL 236
                      :...|.|......|.|.::..||.  .:.|:.:      .:|:||    |.|.  
Zfish   167 SRLARTRFDKNSFQNVTELPHMECEAEMVSPLVT--NAGHVCI------TDCNLY----FQPL-- 217

  Fly   237 GKNYNKTLFVI--YQILQLAKHLQGQGLFLGDLRLQ----------DIVL-------RENLWLQV 282
             .:|..::..|  :.:.::.|...|    |..|.|:          ||.|       |:.|:..:
Zfish   218 -NSYPDSVVQIGLHSVRRIYKRRHG----LRPLGLEVFCTENDLCSDIYLKFYKTKDRDELYYYI 277

  Fly   283 LPRLQCNLLDDDPAGEDMSPLTPLVSEDLGEAREAQQALPSSSTMFDLRFAYDPAHFNLREYTEM 347
            ...|:.:                 |:|...|:                             |...
Zfish   278 ATFLENH-----------------VAEHTAES-----------------------------YMLQ 296

  Fly   348 WCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWV-TDFSGR-----GGGAWRDLTKSKYRLNKG 406
            |..|.:||:.||..|||...||:.:.:.:.:.||| :|:|..     ...::|||:|....|||.
Zfish   297 WQRGHISNYQYLLHLNNLADRSVNDLSQYPVFPWVISDYSSTQLDLLNPASFRDLSKPIGALNKE 361

  Fly   407 DVHLDL-MYAHASQHGSADGSYQAIGDQAPHHVSDFLSEITYFVYMARRTPQSILCAH------- 463
            .:...| .|....:.....||:.:    :|.:|         ..|:.|..|:.:||..       
Zfish   362 RLERLLERYRDMPEPRFMYGSHYS----SPGYV---------LFYLVRVAPEHMLCLQNGRFDHA 413

  Fly   464 ------VRPIWVPAEYPVSIQRLQEWTPD--ECIPEFY-SDPMIFKS-IHEDL---------PDL 509
                  :...|         :...|...|  |.||||| ||....:: :..||         .::
Zfish   414 DRMFNSIGETW---------KNCLEGGTDFKELIPEFYGSDSSFLRNLLGLDLGRRQGGGRVENV 469

  Fly   510 ELPAWATCPEDFICKHREALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNV-----------CL 563
            |||.||:.|:||:.|...|||||||||.||.||||.||||..|..||.|.||           |.
Zfish   470 ELPPWASDPDDFLQKMCLALESQYVSEHLHEWIDLIFGYKQRGSEAVASHNVFHPLTYEGGVDCD 534

  Fly   564 TLVDQHRNLSQRGIV--------QLFASAHPPRRYATPWFSR--TAPRLSQLYASPAKRLAKSTE 618
            ::.|..:.::....:        |||.:.||.|  .||.|..  |.|.||....||.....:|.|
Zfish   535 SIEDPDQKIAMLTQILEFGQTPRQLFVTPHPQR--ITPRFYNLSTTPSLSSSELSPVSPCMESFE 597

  Fly   619 NLQAES 624
            :|..||
Zfish   598 DLTEES 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr81NP_609535.1 Beach 345..588 CDD:100117 88/294 (30%)
WD40 1651..1876 CDD:475233
WD40 repeat 1662..1705 CDD:293791
WD40 repeat 1710..1744 CDD:293791
WD40 repeat 1752..1788 CDD:293791
WD40 repeat 1799..1836 CDD:293791
nsmafXP_003199050.1 PH-like 184..277 CDD:473070 22/111 (20%)
Beach 296..567 CDD:460459 88/292 (30%)
WD40 <623..910 CDD:441893
WD40 repeat 627..663 CDD:293791
WD40 repeat 669..705 CDD:293791
WD40 repeat 710..754 CDD:293791
WD40 repeat 760..795 CDD:293791
WD40 repeat 801..837 CDD:293791
WD40 repeat 883..907 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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