DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr81 and Nsmaf

DIOPT Version :9

Sequence 1:NP_609535.1 Gene:Wdr81 / 34616 FlyBaseID:FBgn0032395 Length:1953 Species:Drosophila melanogaster
Sequence 2:XP_006537725.1 Gene:Nsmaf / 18201 MGIID:1341864 Length:956 Species:Mus musculus


Alignment Length:949 Identity:198/949 - (20%)
Similarity:311/949 - (32%) Gaps:356/949 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 GVSDSSNATSCSAGSCHANVLPALVAIETSTHI--------------------SVFFYP-----P 219
            |.|::..|..|.......|:........|:.|:                    ||.|.|     |
Mouse    38 GSSEAGYARKCRFSLLLLNLEEYYFEQHTAFHVQHQGSQEERKIRGSLKICSKSVIFEPDAISQP 102

  Fly   220 ALECSLYDCITFSPALLGKN----YNKTL---------FVIYQILQLAKH--------LQGQGLF 263
            .|:..|.||:.     :||:    .||..         .:..||..:.:|        .:|:..:
Mouse   103 ILKIPLRDCLK-----IGKHGENGANKHFAKAKSWGISLIFSQIYFIKEHNIVAPYKIERGKMEY 162

  Fly   264 LGDL----RLQDIVLRENLWLQVLPRLQCNLLDDDPAGEDMSPLTPL-----------------V 307
            :.:|    :::|:|  |.| || |.|..|.    |..|:.|:.:|.:                 |
Mouse   163 VFELEVSGKVEDVV--ETL-LQ-LHRASCL----DKLGDQMAMITAILQSRLARTSFDKNRFQSV 219

  Fly   308 SEDLGEAREAQQALPSSS---------------------------TMFDLRFAY----------- 334
            ||.|....:|:...|..:                           |:.|:|..|           
Mouse   220 SEKLHMECKAEMVTPLVTNPGHVCITDTSLYFQPLNGYPKPVVQITLQDVRRIYKRRHGLMPLGL 284

  Fly   335 -----------------------DPAHFNLREYTE-------------MWCNGQLSNFDYLTILN 363
                                   |..:|.:..|.|             .|..|.|||:.||..||
Mouse   285 EVFCTDDDLCSDIYLKFYEPQDRDDLYFYIATYLEHHAAEHTAESYMLQWQRGHLSNYQYLLHLN 349

  Fly   364 NACGRSLTNAAYHHIMPW-VTDFSG-----RGGGAWRDLTKSKYRLNKGDVHLDLMYAHASQHGS 422
            |...||..:.:.:.:.|| ::|:|.     .....:|||:|....||.  ..|:.:...      
Mouse   350 NLADRSCNDLSQYPVFPWIISDYSSPELDLSNPATFRDLSKPVGALNA--ERLERLLTR------ 406

  Fly   423 ADGSYQAIGDQAPHHVSDFLSEITYFVYMARRTPQSILCAH-------------VRPIWVPAEYP 474
                ||.:.:....:.|.:.|......|:.|..|:.:||..             :...|      
Mouse   407 ----YQEMPEPRFMYGSHYSSPGYVLFYLVRIAPEYMLCLQNGRFDNADRMFNSIAETW------ 461

  Fly   475 VSIQRLQEWTPD--ECIPEFYSDPMIF--KSIHEDL---------PDLELPAWATCPEDFICKHR 526
               :...:...|  |.|||||.:.:.|  .|:..||         .|::|||||:.|:||:.|::
Mouse   462 ---KNCLDGATDFKELIPEFYDEDVSFLVNSLKLDLGKRQGGQMVDDVDLPAWASSPQDFLQKNK 523

  Fly   527 EALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNVC--------------------LTLVDQHRN 571
            :||||.||||.||.||||.||||..|..|:.:.||.                    :.::.|...
Mouse   524 DALESGYVSEHLHEWIDLIFGYKQKGSEAIGAHNVFHPLTYEGGVDLNSIEDPDEKVAMLTQILE 588

  Fly   572 LSQRGIVQLFASAHPPRRYATPWF---SRTAPRLSQLYASPAKRLAKSTENLQAESAT--GSSHL 631
            ..|.. .|||.:.||  |..||.|   |:.:...:.|..||.....:|.|:|..||.|  .|:..
Mouse   589 FGQTP-KQLFVTPHP--RRITPKFKSLSQASSYNASLTDSPVSPGEESFEDLTEESRTLAWSNIA 650

  Fly   632 SLRLGDDGSSGSVHSSSASASASNFYAITNFIELPENYNPALLLHNLETLEAFYARTFPQQRASA 696
            .|:|.:   ...:|..:.:..|.:....:.|....::           ||:.|            
Mouse   651 KLQLHE---QYKIHKEAVTGIAVSCNGSSVFTTSQDS-----------TLKMF------------ 689

  Fly   697 NPEEKMISSDLMFEQNSAEHSFTNQLFASGDELPPKSKNLLREKRNCLQHLLNVRKERDLHVLGC 761
            :.|.||:...:         ||:|...:|...||..:..:.....|      ||           
Mouse   690 SKESKMLQRSI---------SFSNMALSSCLLLPGDTTVISSSWDN------NV----------- 728

  Fly   762 LIIELFAMQRLRPLLMGNG-------------LTATFDSRLSACRTVAQLHRQELPKPVRRVVRL 813
             .....|..|.:..|||:.             .:.::||.:.....|.    .|:|...|....|
Mouse   729 -YFYSIAFGRRQDTLMGHDDAVSKICWHNDRLYSGSWDSTVKVWSGVP----AEMPGTKRHQFDL 788

  Fly   814 LLQLEQPGEEDQGLPQPPNPAQLLEPMFSNLLLPFPSHYMAVYALVRSLHAFEANAV-------- 870
            |.:||                                |.:::..|:..::....|||        
Mouse   789 LAELE--------------------------------HDVSMTYLLEKVNTINLNAVSTLLVSGT 821

  Fly   871 ------LLELQT-----HFSCKGGRECERYTEMDRQRVL 898
                  :.:|.|     ..||..|..|:.....|.:.:|
Mouse   822 KEGMVNIWDLTTATLLHQTSCHSGTVCDAAFSPDSRHIL 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr81NP_609535.1 Beach 345..588 CDD:100117 84/307 (27%)
WD40 <1644..1877 CDD:225201
WD40 1651..1876 CDD:295369
WD40 repeat 1662..1705 CDD:293791
WD40 repeat 1710..1744 CDD:293791
WD40 repeat 1752..1788 CDD:293791
WD40 repeat 1799..1836 CDD:293791
NsmafXP_006537725.1 PH_BEACH 221..314 CDD:275391 10/92 (11%)
Beach 333..604 CDD:366934 83/294 (28%)
WD40 654..953 CDD:238121 47/296 (16%)
WD40 repeat 665..702 CDD:293791 8/68 (12%)
WD40 repeat 708..744 CDD:293791 9/53 (17%)
WD40 repeat 749..793 CDD:293791 8/47 (17%)
WD40 repeat 806..841 CDD:293791 5/34 (15%)
WD40 repeat 847..884 CDD:293791 3/14 (21%)
WD40 repeat 928..952 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1786
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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