DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr81 and lyst-1

DIOPT Version :9

Sequence 1:NP_609535.1 Gene:Wdr81 / 34616 FlyBaseID:FBgn0032395 Length:1953 Species:Drosophila melanogaster
Sequence 2:NP_510030.2 Gene:lyst-1 / 181379 WormBaseID:WBGene00011361 Length:2760 Species:Caenorhabditis elegans


Alignment Length:539 Identity:115/539 - (21%)
Similarity:198/539 - (36%) Gaps:151/539 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 LREYTEMWCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWVTDFSGRGGGAWRDL-TKSKYRLN 404
            |..||:.|..|::|||:|||:||...||::.:::...|.|.:.   .:.|....|| .|:.||  
 Worm  2083 LLAYTKRWEEGKMSNFEYLTMLNLFAGRTIHDSSSSPIFPRIL---AKFGDKSVDLQDKTIYR-- 2142

  Fly   405 KGDVHLDLMYA---------HASQHGSADGSYQAIGDQAPHHVSDFLSEITYFVYMARRTPQSIL 460
                .||...|         | .:|.:.....:.|....|:|.....|         .|...|..
 Worm  2143 ----KLDRPVAAQDPVSVEKH-KEHYNELKENEEISHLTPYHFGSMCS---------NRGVVSFF 2193

  Fly   461 CAHVRPIWVPAEYPVSIQRLQEWTPD----------------------ECIPEFYSDPMIFKSIH 503
            ...:.|.   .|..:.:|..:...||                      |.:||.::...:.::.:
 Worm  2194 NIRLLPF---GEEAIELQDGRFDFPDRLFHNIESGLGLGKIESSNDYKELVPELFTTVEVLRNDN 2255

  Fly   504 ----------EDLPDLELPAWA-----TCPEDFICKHREALESQYVSERLHHWIDLNFGYKLSGK 553
                      |.:.|:::|.|.     ...|:||..||.||||:.|...|||||||.||||..||
 Worm  2256 GNQFGEKQNGETVNDVDVPQWCYMDEKAVHENFIYLHRHALESEIVQSMLHHWIDLVFGYKSRGK 2320

  Fly   554 AAVKSKNVCLTLV------------------DQHRNLSQRGIVQLFASAHPPRRYATPWFSRTAP 600
            :|..:.||....|                  :.::.......:|||..:||.|....  ..|::.
 Worm  2321 SAHDAINVYHPAVYPGNSPPPSFDRVMTNAYEANQKTLGTAPIQLFTQSHPKREVLQ--HRRSSV 2383

  Fly   601 R------------LSQ-------LYASPAKRLAKSTENLQAE---SATGS--------------- 628
            |            :.|       :.....:|:.:..:||:::   .|..|               
 Worm  2384 RNMHGLAFGKELTIGQYDVGEYTMDTQTTQRVWRRMKNLKSKIFNKANASDQENFHLFQKNRDKR 2448

  Fly   629 ----SHLSLRLGDDG---SSGSVHSSSASASASNFYAITNFIELPENYNPALLLHN-LETLEAFY 685
                |.:|.::.:|.   |.|  :|..:...|....|::    :.:||...:||.. :|..:..|
 Worm  2449 EKDPSDISFKIKEDQLILSDG--NSEISKGHAQKIEAVS----VDDNYVACMLLRGPIEIYKMAY 2507

  Fly   686 ARTFPQQRASANPEEKMISSDLMFEQNSA----EHSFTNQLFASGDELPPKSKNLLREKRNCLQH 746
             |.:.:.|.:.:...:..:.:|:.|....    |..:|:.      |:......:....:|..:.
 Worm  2508 -RQYSKSRIAVDRVLRSDNKELVIEYCGTLPVQEGHYTDV------EVCTSFSTIFTIHKNENKS 2565

  Fly   747 LLNVRKERDLHVLGCLIIE 765
            :::|......|:.||..||
 Worm  2566 IISVWNLHTHHIRGCCTIE 2584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr81NP_609535.1 Beach 345..588 CDD:100117 76/307 (25%)
WD40 <1644..1877 CDD:225201
WD40 1651..1876 CDD:295369
WD40 repeat 1662..1705 CDD:293791
WD40 repeat 1710..1744 CDD:293791
WD40 repeat 1752..1788 CDD:293791
WD40 repeat 1799..1836 CDD:293791
lyst-1NP_510030.2 Beach 2087..2373 CDD:214982 76/307 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1786
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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