Protein Alignment Rh5 and Opn1mw

DIOPT Version :9

• Sequence 1: NP_001285859.1
• Gene: Rh5 / 34615
• FlyBaseID: FBgn0014019
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_446000.1
• Gene: Opn1mw / 89810
• RGDID: 620978
• Length: 359
• Species: Rattus norvegicus
• Alignment Length: 359
• Identity: 88/359 - (24%)
• Similarity: 167/359 - (46%)
• Gaps: 64/359 - (17%)

  Fly    42 RGFREAPIYYHAGFYIA------FIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL- 99
            ||..|.|.|:.|..::.      .|:::::|:|.||||:......|.||.|.|.:::|||:.||
  Rat    32 RGPFEGPNYHIAPRWVYHLTSTWMILVVIASVFTNGLVLAATMRFKKLRHPLNWILVNLAVADLA 96

  Fly   100 --FMCTNMPHYLINATVGYIVGGDLGCDIYALNG------GISGMGASITNAFIAFDRYKTISNP 156
              .:.:.:.  ::|...||.|   ||..:..:.|      ||:|:.:.   |.|:::|:..:..|
  Rat    97 ETIIASTIS--VVNQIYGYFV---LGHPLCVIEGYIVSLCGITGLWSL---AIISWERWLVVCKP 153

  Fly   157 -----IDGRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDEN--RL 214
                 .|.:|:    .:.|:|:|:||..::..|:|. |.||.|.|..|:|..|..:.|...  :.
  Rat   154 FGNVRFDAKLA----TVGIVFSWVWAAVWTAPPIFG-WSRYWPYGLKTSCGPDVFSGTSYPGVQS 213

  Fly   215 FVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIAKA 279
            ::..:.|...:.|:::|::.|.:::..:|.    :|:|.|:          :......|..:.:.
  Rat   214 YMMVLMVTCCIFPLSIIVLCYLQVWLAIRA----VAKQQKE----------SESTQKAEKEVTRM 264

  Fly   280 ALIIYMLFILAWTPYSVVALIGCFGEQQ---LITPFVSMLPCLACKSVSCLDPWVYATSHPKYR- 340
            .:::...:.|.|.||:..|   ||....   ...|.|:.||....||.:..:|.:|...:.::|
  Rat   265 VVVMVFAYCLCWGPYTFFA---CFATAHPGYAFHPLVASLPSYFAKSATIYNPIIYVFMNRQFRN 326

  Fly   341 --LELERRLPWLGIREKHATSGTSGGQESVASVS 372
              |:|      .|.:...::..:|..:..|:|||
  Rat   327 CILQL------FGKKVDDSSELSSTSKTEVSSVS 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh5	NP_001285859.1	7tm_4	60..>236	CDD:304433	52/191 (27%)
		7tm_1	69..332	CDD:278431	69/281 (25%)
Opn1mw	NP_446000.1	Required for 11-cis-retinal regeneration. /evidence=ECO:0000250|UniProtKB:P04001	12..38		3/5 (60%)
		7tm_1	66..317	CDD:278431	69/280 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910