Protein Alignment Rh5 and opn8b

DIOPT Version :10

• Sequence 1: NP_477096.1
• Gene: Rh5 / 34615
• FlyBaseID: FBgn0014019
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001303874.1
• Gene: opn8b / 569628
• ZFINID: ZDB-GENE-070705-120
• Length: 357
• Species: Danio rerio
• Alignment Length: 305
• Identity: 84/305 - (27%)
• Similarity: 153/305 - (50%)
• Gaps: 31/305 - (10%)

  Fly    51 YHAGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNM-PHYLINATV 114
            |..|.::..|.::  ||.||.:|:.:.....:...|..||.:|||:.||.....| |..:.:|..
Zfish    14 YGIGAFLLLIAIL--SILGNLMVLVMAYKRSNHMKPPELLSVNLAVTDLGAAVTMYPLAVASAWN 76

  Fly   115 GYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRY---KTISNPIDGRLSYGQIVLLILFTWLW 176
            .:.:|||:.|..|.|.|.:.|..:.:|...:|..|:   .|:.:|.: ::|.....:|:..|||:
Zfish    77 HHWIGGDVSCVYYGLMGFLFGAASMMTLTIMAIVRFIVSLTLQSPKE-KISKRNAKILVATTWLY 140

  Fly   177 ATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYY----- 236
            |..:::.||.. ||:|.||.|..:|:.|:....:.::.||.|||:.:.::| .:|:||.|
Zfish   141 ALLWAIFPLIG-WGKYGPEPFGLSCTLDWRDMKEHSQSFVITIFLMNLILP-AIIIVSCYCGIAL 203

  Fly   237 KLFTHVRVHEKMLAEQAKKMNVKSLSANANADNM-SVELRIAKAALIIYMLFILAWTPYSVVALI 300
            :|:                :..||:..:.:..|| .::.|:...|::|.:.|:..|.||.:|:|.
Zfish   204 RLY----------------VTYKSMDDSNHVPNMIKMQRRLMVIAVLISIGFVGCWAPYGIVSLW 252

  Fly   301 GCFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELER 345
            ..:.....|...|||||||..|:.:..:|::|......::.|:.:
Zfish   253 SIYRPGDSIPAEVSMLPCLFAKTSTVYNPFIYYIFSKTFKREVNQ 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh5	NP_477096.1	7tmA_photoreceptors_insect	54..343	CDD:320207	82/298 (28%)
		TM helix 1	54..80	CDD:320207	7/25 (28%)
		TM helix 2	87..112	CDD:320207	9/25 (36%)
		TM helix 3	124..154	CDD:320207	9/32 (28%)
		TM helix 4	164..184	CDD:320207	5/19 (26%)
		TM helix 5	212..241	CDD:320207	11/33 (33%)
		TM helix 6	271..301	CDD:320207	9/29 (31%)
		TM helix 7	311..336	CDD:320207	10/24 (42%)
opn8b	NP_001303874.1	7tm_GPCRs	30..295	CDD:475119	78/283 (28%)
		TM helix 2	49..71	CDD:410628	9/21 (43%)
		TM helix 3	87..109	CDD:410628	5/21 (24%)
		TM helix 4	132..148	CDD:410628	5/15 (33%)
		TM helix 5	176..199	CDD:410628	9/23 (39%)
		TM helix 6	229..251	CDD:410628	7/21 (33%)
		TM helix 7	263..288	CDD:410628	10/24 (42%)