Protein Alignment Rh5 and ninaE

DIOPT Version :10

• Sequence 1: NP_477096.1
• Gene: Rh5 / 34615
• FlyBaseID: FBgn0014019
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Alignment Length: 364
• Identity: 135/364 - (37%)
• Similarity: 198/364 - (54%)
• Gaps: 22/364 - (6%)

  Fly    17 LGDGSVFPMGHGYPAEYQHMVHAHWRGFREA-PIYYHAGFYIAFIVLM-LSSIFGNGLVIWIFST 79
            |.:|||...   ...:..|::..:|..|... ||:  |....|::::: :.|..|||:||:||:|
  Fly    18 LSNGSVVDK---VTPDMAHLISPYWNQFPAMDPIW--AKILTAYMIMIGMISWCGNGVVIYIFAT 77

  Fly    80 SKSLRTPSNLLILNLAIFDL-FMCTNMPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNA 143
            :||||||:|||::||||.|. .|.||.|...||......|.|.:.|||||..|...|..:..:..
  Fly    78 TKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMC 142

  Fly   144 FIAFDRYKTISNPIDGR-----LSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSF 203
            .|:.|||:.|...:.||     |:.|:|.    :.|..::.:.:.|.|. |.||.|||.||:|..
  Fly   143 MISLDRYQVIVKGMAGRPMTIPLALGKIA----YIWFMSSIWCLAPAFG-WSRYVPEGNLTSCGI 202

  Fly   204 DYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANAD 268
            |||......|.::....::.|.||:.:|..||:.:...|..|||.:.|||||||||||.::.:|:
  Fly   203 DYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAE 267

  Fly   269 NMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVYA 333
            . |.|.::||.||:...|:.:|||||.|:..:|.|..:.| ||..::......||.:|.:|.||.
  Fly   268 K-SAEGKLAKVALVTITLWFMAWTPYLVINCMGLFKFEGL-TPLNTIWGACFAKSAACYNPIVYG 330

  Fly   334 TSHPKYRLELERRLPWLGIREKHATSGTSGGQESVASVS 372
            .|||||||.|:.:.|.....:  ...|.|...:|.|:.|
  Fly   331 ISHPKYRLALKEKCPCCVFGK--VDDGKSSDAQSQATAS 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh5	NP_477096.1	7tmA_photoreceptors_insect	54..343	CDD:320207	118/295 (40%)
		TM helix 1	54..80	CDD:320207	9/26 (35%)
		TM helix 2	87..112	CDD:320207	13/25 (52%)
		TM helix 3	124..154	CDD:320207	11/29 (38%)
		TM helix 4	164..184	CDD:320207	3/19 (16%)
		TM helix 5	212..241	CDD:320207	7/28 (25%)
		TM helix 6	271..301	CDD:320207	13/29 (45%)
		TM helix 7	311..336	CDD:320207	7/24 (29%)
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	118/294 (40%)
		TM helix 1	52..78	CDD:320207	9/25 (36%)
		TM helix 2	85..111	CDD:320207	13/25 (52%)
		TM helix 3	123..153	CDD:320207	11/29 (38%)
		TM helix 4	164..184	CDD:320207	4/23 (17%)
		TM helix 5	211..240	CDD:320207	7/28 (25%)
		TM helix 6	269..299	CDD:320207	13/29 (45%)
		TM helix 7	308..333	CDD:320207	7/24 (29%)