| Sequence 1: | NP_477096.1 | Gene: | Rh5 / 34615 | FlyBaseID: | FBgn0014019 | Length: | 382 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038939470.1 | Gene: | Opn5 / 316259 | RGDID: | 727869 | Length: | 533 | Species: | Rattus norvegicus |
| Alignment Length: | 318 | Identity: | 88/318 - (27%) |
|---|---|---|---|
| Similarity: | 146/318 - (45%) | Gaps: | 48/318 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 53 AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTNMPHYLINATVGY 116
Fly 117 IVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGRLSYG--------QIVLLILFT 173
Fly 174 WLWATPFSVLPLFQIWGRYQPEGFLTTCSFDY--LTNTDENRLFVRTIFVWSYVIPMTMILVSYY 236
Fly 237 KLFTHVRVHEKMLA------EQAKKMNVKSLSANANADNMSVEL--------------------- 274
Fly 275 RIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVY 332 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh5 | NP_477096.1 | 7tmA_photoreceptors_insect | 54..343 | CDD:320207 | 87/317 (27%) |
| TM helix 1 | 54..80 | CDD:320207 | 11/25 (44%) | ||
| TM helix 2 | 87..112 | CDD:320207 | 7/25 (28%) | ||
| TM helix 3 | 124..154 | CDD:320207 | 10/29 (34%) | ||
| TM helix 4 | 164..184 | CDD:320207 | 5/27 (19%) | ||
| TM helix 5 | 212..241 | CDD:320207 | 7/28 (25%) | ||
| TM helix 6 | 271..301 | CDD:320207 | 11/50 (22%) | ||
| TM helix 7 | 311..336 | CDD:320207 | 7/22 (32%) | ||
| Opn5 | XP_038939470.1 | 7tmA_Opsin5_neuropsin | 34..353 | CDD:320202 | 88/318 (28%) |
| TM helix 1 | 35..61 | CDD:320202 | 12/26 (46%) | ||
| TM helix 2 | 68..95 | CDD:320202 | 7/26 (27%) | ||
| TM helix 3 | 106..136 | CDD:320202 | 10/29 (34%) | ||
| TM helix 4 | 149..167 | CDD:320202 | 4/19 (21%) | ||
| TM helix 5 | 196..226 | CDD:320202 | 7/29 (24%) | ||
| TM helix 6 | 245..312 | CDD:320202 | 15/66 (23%) | ||
| TM helix 7 | 322..347 | CDD:320202 | 7/22 (32%) |