Protein Alignment Rh5 and Opn5

DIOPT Version :9

• Sequence 1: NP_001285859.1
• Gene: Rh5 / 34615
• FlyBaseID: FBgn0014019
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_038939470.1
• Gene: Opn5 / 316259
• RGDID: 727869
• Length: 533
• Species: Rattus norvegicus
• Alignment Length: 318
• Identity: 88/318 - (27%)
• Similarity: 146/318 - (45%)
• Gaps: 48/318 - (15%)

  Fly    53 AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTNMPHYLINATVGY 116
            ||||:..|.::  |.||||.|:::.|..|....|:.::.:|||:.|| ......|..:|:.....
  Rat    36 AGFYLTIIGIL--STFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVVGKPFTIISCFCHR 98

  Fly   117 IVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGRLSYG--------QIVLLILFT 173
            .|.|..||..|...|...|.|:.||...::.|||..|.     .||||        .|.|.::
  Rat    99 WVFGWFGCRWYGWAGFFFGCGSLITMTAVSLDRYLKIC-----YLSYGVWLKRKHAYICLAVI-- 156

  Fly   174 WLWATPFSVLPLFQIWGRYQPEGFLTTCSFDY--LTNTDENRLFVRTIFVWSYVIPMTMILVSYY 236
            |.:|:.::.:||..: |.|.||.|.|:|:.|:  ...:...::|:.:|..:..::|..:|:.||.
  Rat   157 WAYASFWTTMPLVGL-GDYAPEPFGTSCTLDWWLAQASGGGQVFILSILFFCLLLPTAVIVFSYA 220

  Fly   237 KLFTHVRVHEKMLA------EQAKKMNVKSLSANANADNMSVEL--------------------- 274
            |:...|:...|.:|      ..:..:.||.......||:....|
  Rat   221 KIIAKVKSSSKEVAHFDSRIHSSHVLEVKLTKGLVRADSSPESLPRSVFSTAEPINCHVLSISHS 285

  Fly   275 RIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVY 332
            |::..|::|...|::||.||:||::...||....|...:|::|.|..||.:..:|.:|
  Rat   286 RVSTVAMLICAGFLIAWIPYAVVSVWSAFGRPNSIPIQLSVVPTLLAKSAAMYNPIIY 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh5	NP_001285859.1	7tm_4	60..>236	CDD:304433	54/186 (29%)
		7tm_1	69..332	CDD:278431	80/300 (27%)
Opn5	XP_038939470.1	7tmA_Opsin5_neuropsin	34..353	CDD:320202	88/318 (28%)
		TM helix 1	36..60	CDD:320202	11/25 (44%)
		TM helix 2	69..91	CDD:320202	6/21 (29%)
		TM helix 3	107..129	CDD:320202	6/21 (29%)
		TM helix 4	151..167	CDD:320202	4/17 (24%)
		TM helix 5	197..220	CDD:320202	5/22 (23%)
		TM helix 6	251..310	CDD:320202	13/58 (22%)
		TM helix 7	322..347	CDD:320202	7/22 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910