DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh5 and OPN1MW

DIOPT Version :10

Sequence 1:NP_477096.1 Gene:Rh5 / 34615 FlyBaseID:FBgn0014019 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_000504.1 Gene:OPN1MW / 2652 HGNCID:4206 Length:364 Species:Homo sapiens


Alignment Length:361 Identity:90/361 - (24%)
Similarity:165/361 - (45%) Gaps:68/361 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RGFREAPIY-------YH-AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFD 98
            ||..|.|.|       || ...::.|:|  ::|:|.||||:......|.||.|.|.:::|||:.|
Human    37 RGPFEGPNYHIAPRWVYHLTSVWMIFVV--IASVFTNGLVLAATMKFKKLRHPLNWILVNLAVAD 99

  Fly    99 L---FMCTNMPHYLINATVGYIVGGDLGCDIYALNG------GISGMGASITNAFIAFDRYKTIS 154
            |   .:.:.:.  ::|...||.|   ||..:..|.|      ||:|:.:.   |.|:::|:..:.
Human   100 LAETVIASTIS--VVNQVYGYFV---LGHPMCVLEGYTVSLCGITGLWSL---AIISWERWMVVC 156

  Fly   155 NP-----IDGRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDEN-- 212
            .|     .|.:|:    ::.|.|:|:||..::..|:|. |.||.|.|..|:|..|..:.:...  
Human   157 KPFGNVRFDAKLA----IVGIAFSWIWAAVWTAPPIFG-WSRYWPHGLKTSCGPDVFSGSSYPGV 216

  Fly   213 RLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIA 277
            :.::..:.|...:.|:::|::.|.:::..:|.    :|:|.|:          :......|..:.
Human   217 QSYMIVLMVTCCITPLSIIVLCYLQVWLAIRA----VAKQQKE----------SESTQKAEKEVT 267

  Fly   278 KAALIIYMLFILAWTPYSVVALIGCFGEQQLITPF---VSMLPCLACKSVSCLDPWVYATSHPKY 339
            :..:::.:.|...|.||   |...||.......||   ::.||....||.:..:|.:|...:.::
Human   268 RMVVVMVLAFCFCWGPY---AFFACFAAANPGYPFHPLMAALPAFFAKSATIYNPVIYVFMNRQF 329

  Fly   340 R---LELERRLPWLGIREKHATSGTSGGQESVASVS 372
            |   |:|      .|.:....:..:|..:..|:|||
Human   330 RNCILQL------FGKKVDDGSELSSASKTEVSSVS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh5NP_477096.1 7tmA_photoreceptors_insect 54..343 CDD:320207 76/310 (25%)
TM helix 1 54..80 CDD:320207 8/25 (32%)
TM helix 2 87..112 CDD:320207 6/27 (22%)
TM helix 3 124..154 CDD:320207 8/35 (23%)
TM helix 4 164..184 CDD:320207 5/19 (26%)
TM helix 5 212..241 CDD:320207 4/30 (13%)
TM helix 6 271..301 CDD:320207 6/29 (21%)
TM helix 7 311..336 CDD:320207 8/27 (30%)
OPN1MWNP_000504.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Required for 11-cis-retinal regeneration. /evidence=ECO:0000269|PubMed:30948514 17..43 3/5 (60%)
7tm_GPCRs 42..333 CDD:475119 79/322 (25%)
TM helix 1 56..80 CDD:410628 8/25 (32%)
TM helix 2 89..111 CDD:410628 6/23 (26%)
TM helix 3 127..149 CDD:410628 7/24 (29%)
TM helix 4 171..187 CDD:410628 5/15 (33%)
TM helix 5 217..240 CDD:410628 3/22 (14%)
TM helix 6 267..289 CDD:410628 5/24 (21%)
TM helix 7 301..326 CDD:410628 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

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