Protein Alignment Rh5 and opn8c

DIOPT Version :10

• Sequence 1: NP_477096.1
• Gene: Rh5 / 34615
• FlyBaseID: FBgn0014019
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001304693.1
• Gene: opn8c / 103909302
• ZFINID: ZDB-GENE-040724-51
• Length: 398
• Species: Danio rerio
• Alignment Length: 299
• Identity: 84/299 - (28%)
• Similarity: 137/299 - (45%)
• Gaps: 22/299 - (7%)

  Fly    54 GFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCTNMPHYLINATVGYI- 117
            |..|..||::  |:.|||:|:.|....:.....|.||.:|||:.|...|.......|.::..::
Zfish    34 GLIIMSIVIL--SVLGNGVVLVISYRRRKKIAGSELLCVNLAVVDFLCCICFYPLSILSSFSHVW 96

  Fly   118 VGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGRLSYGQIVLLILFTWLWATPFSV 182
            :|..:.|..|.|...|.|:....|.|.|:..||......|  .|....|.|:.:.|||.|..:|.
Zfish    97 LGRHITCVYYGLGCYIFGLCGMFTIAAISVIRYIKTCYAI--WLEGVNIRLVCVATWLIAAVWSS 159

  Fly   183 LPLFQIWGRYQPEGFLTTCSF---DYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRV 244
            .|||. ||.|.||.:..:|:.   .|.|:| ::.::|...|....::|:.:|:||..|:...:..
Zfish   160 FPLFG-WGEYVPEPYGISCTIAWRRYHTST-KDAIYVICSFACFVLLPVLLIMVSQCKILLKIYR 222

  Fly   245 HEKMLAEQAKKMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCF-GEQQL 308
            ..:.|:.:....|::           ..|..::.....|.:.|||||.||:||:.:..| .:.|.
Zfish   223 FSRTLSARGIHCNLR-----------HAEKHLSVMFFCISLGFILAWAPYAVVSFLFIFHKDAQY 276

  Fly   309 ITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELERRL 347
            :.|...:.|.|..||....:|::|...:..:|.||...|
Zfish   277 MAPEGFIFPALFAKSSHVYNPFIYFYFNKAFRQELRNLL 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh5	NP_477096.1	7tmA_photoreceptors_insect	54..343	CDD:320207	81/293 (28%)
		TM helix 1	54..80	CDD:320207	10/25 (40%)
		TM helix 2	87..112	CDD:320207	9/24 (38%)
		TM helix 3	124..154	CDD:320207	10/29 (34%)
		TM helix 4	164..184	CDD:320207	7/19 (37%)
		TM helix 5	212..241	CDD:320207	7/28 (25%)
		TM helix 6	271..301	CDD:320207	11/29 (38%)
		TM helix 7	311..336	CDD:320207	7/24 (29%)
opn8c	NP_001304693.1	7tm_GPCRs	31..311	CDD:475119	81/293 (28%)
		TM helix 1	33..57	CDD:320202	10/24 (42%)
		TM helix 2	66..88	CDD:320202	7/21 (33%)
		TM helix 3	104..126	CDD:320202	7/21 (33%)
		TM helix 4	145..161	CDD:320202	6/15 (40%)
		TM helix 5	191..214	CDD:320202	6/22 (27%)
		TM helix 6	244..266	CDD:320202	10/21 (48%)
		TM helix 7	279..304	CDD:320202	7/24 (29%)