| Sequence 1: | NP_477096.1 | Gene: | Rh5 / 34615 | FlyBaseID: | FBgn0014019 | Length: | 382 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001269303.1 | Gene: | tmtops3a / 102031125 | ZFINID: | ZDB-GENE-130828-1 | Length: | 379 | Species: | Danio rerio |
| Alignment Length: | 273 | Identity: | 69/273 - (25%) |
|---|---|---|---|
| Similarity: | 136/273 - (49%) | Gaps: | 19/273 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 62 LMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDLFMCT-NMPHYLINATVGYIVGGDLGCD 125
Fly 126 IYALNGGISGMGASITNAFIAFDRYKTISNPIDGRLS-YGQIVLLILFTWLWATPFSVLPLFQIW 189
Fly 190 GRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAK 254
Fly 255 KMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCL 319
Fly 320 ACKSVSCLDPWVY 332 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh5 | NP_477096.1 | 7tmA_photoreceptors_insect | 54..343 | CDD:320207 | 69/273 (25%) |
| TM helix 1 | 54..80 | CDD:320207 | 4/17 (24%) | ||
| TM helix 2 | 87..112 | CDD:320207 | 7/25 (28%) | ||
| TM helix 3 | 124..154 | CDD:320207 | 5/29 (17%) | ||
| TM helix 4 | 164..184 | CDD:320207 | 3/19 (16%) | ||
| TM helix 5 | 212..241 | CDD:320207 | 5/28 (18%) | ||
| TM helix 6 | 271..301 | CDD:320207 | 9/29 (31%) | ||
| TM helix 7 | 311..336 | CDD:320207 | 7/22 (32%) | ||
| tmtops3a | NP_001269303.1 | 7tmA_tmt_opsin | 45..320 | CDD:320214 | 69/273 (25%) |
| TM helix 1 | 46..72 | CDD:320214 | 4/17 (24%) | ||
| TM helix 2 | 79..105 | CDD:320214 | 7/25 (28%) | ||
| TM helix 3 | 117..147 | CDD:320214 | 5/29 (17%) | ||
| TM helix 4 | 158..180 | CDD:320214 | 5/22 (23%) | ||
| TM helix 5 | 205..235 | CDD:320214 | 5/37 (14%) | ||
| TM helix 6 | 248..278 | CDD:320214 | 10/37 (27%) | ||
| TM helix 7 | 288..313 | CDD:320214 | 7/22 (32%) |