DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd1 and PAS2

DIOPT Version :10

Sequence 1:NP_609534.1 Gene:Hacd1 / 34614 FlyBaseID:FBgn0032394 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001190277.1 Gene:PAS2 / 830912 AraportID:AT5G10480 Length:230 Species:Arabidopsis thaliana


Alignment Length:224 Identity:64/224 - (28%)
Similarity:117/224 - (52%) Gaps:15/224 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SAVTKLYLFAYNAGQVVGWSYILWQLVNYYILQGPEFRAQVTLWEYTRLAVIIFQNAAFVEILNA 83
            |.|.::||..||.....||:.:|:..:......|.|     .:::.....:.:.|.||.:|||:.
plant     6 SVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYE-----NVYDAIEKPLQLAQTAAVLEILHG 65

  Fly    84 SFGLVKSNPVVTGFQVFSRMMVVVGVVMATPTGKVSPGLPIALLAWAIT---------EIIRYGY 139
            ..|||:|....|..|:.||:.:..|::.:.|..:....:...:::|:||         |||||.:
plant    66 LVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTWIVEIIRYSF 130

  Fly   140 YAL-NIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSYARENSVWSVVMPNKWNATFSYF 203
            :.. ..:...|.:.::|||::|::|||.|:|.|:...:.|..:.:.:.::||.|||..|.:|.:|
plant   131 FGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFF 195

  Fly   204 GFLWIVMLGYIPIFPQLYLHMFAQRRKIL 232
            ....:|:..|:|..|.:|.:|..||::.|
plant   196 YATILVLAIYVPGSPHMYRYMLGQRKRAL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd1NP_609534.1 PTPLA 73..234 CDD:461286 53/170 (31%)
PAS2NP_001190277.1 PLN02838 1..230 CDD:166479 64/224 (29%)

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