DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd1 and Hacd1

DIOPT Version :10

Sequence 1:NP_609534.1 Gene:Hacd1 / 34614 FlyBaseID:FBgn0032394 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001094471.1 Gene:Hacd1 / 680115 RGDID:1595507 Length:248 Species:Rattus norvegicus


Alignment Length:233 Identity:79/233 - (33%)
Similarity:134/233 - (57%) Gaps:4/233 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKAVSKSSKPGASKEPSAVTKLYLFAYNAGQVVGWSYILWQLVNYYILQGPEFRAQVTLWEYTR 66
            :::|..:....|..:....:...:|..||.....||..:...:|.:|:.:|    ....|::..:
  Rat    12 ASEASDEKEATGKRRRLGFLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKG----THRGLYKSIQ 72

  Fly    67 LAVIIFQNAAFVEILNASFGLVKSNPVVTGFQVFSRMMVVVGVVMATPTGKVSPGLPIALLAWAI 131
            ..:..||..|.:|:::...|:|.::.:|||.||.||:.:|..:..:....:....:.:.|::|.:
  Rat    73 KTLKFFQTFALLEVVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTV 137

  Fly   132 TEIIRYGYYALNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSYARENSVWSVVMPNKW 196
            |||.||.:|..:::..:|||:.:.||..||:|||:||.||||..:.|..|.:::.::||.:|||:
  Rat   138 TEITRYSFYTFSLLDHLPHFIKWARYNFFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKY 202

  Fly   197 NATFSYFGFLWIVMLGYIPIFPQLYLHMFAQRRKILGG 234
            |.:|.|:.||.|.|..|||:|||||.||..||||:|.|
  Rat   203 NVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLHG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd1NP_609534.1 PTPLA 73..234 CDD:461286 66/160 (41%)
Hacd1NP_001094471.1 PTPLA 79..238 CDD:461286 62/158 (39%)

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