DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd1 and hacd2

DIOPT Version :9

Sequence 1:NP_609534.1 Gene:Hacd1 / 34614 FlyBaseID:FBgn0032394 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_956155.1 Gene:hacd2 / 334121 ZFINID:ZDB-GENE-030131-6053 Length:239 Species:Danio rerio


Alignment Length:232 Identity:87/232 - (37%)
Similarity:132/232 - (56%) Gaps:4/232 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKAVSKSSKPGASKEPSAVTKLYLFAYNAGQVVGWSYILWQLVNYYILQGPEFRAQVTLWEYTR 66
            ::|.....|.....|.|..:...||..||.....||..|...||..|:.:|    :...|:....
Zfish     3 TSKTAHSESGHKKKKGPGTLATAYLVIYNVIMTAGWLVIAVGLVRAYLARG----SYHGLYYSIE 63

  Fly    67 LAVIIFQNAAFVEILNASFGLVKSNPVVTGFQVFSRMMVVVGVVMATPTGKVSPGLPIALLAWAI 131
            ..:..||..|.:|||:.:.|:|.|:.|:|||||.||:.:...|..:....:....:.:.::||.:
Zfish    64 KPLKFFQTGALLEILHCAVGIVPSSVVLTGFQVMSRVFLTWAVTHSVREVQSEDSVLLFVVAWTV 128

  Fly   132 TEIIRYGYYALNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSYARENSVWSVVMPNKW 196
            ||||||.:|..:::..:|:.:.:.|||.||||||:||.||||..:.|..|.::..::|:.:|||:
Zfish   129 TEIIRYSFYTFSLLNHLPYLIKWARYTFFIVLYPMGVMGELLTIYAALPYVQKAGLYSITLPNKY 193

  Fly   197 NATFSYFGFLWIVMLGYIPIFPQLYLHMFAQRRKILG 233
            |.:|.|..||..||:.|||:|||||.||..||:|:||
Zfish   194 NFSFDYHTFLIFVMISYIPLFPQLYFHMMRQRKKVLG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd1NP_609534.1 PTPLA 73..232 CDD:282269 68/158 (43%)
hacd2NP_956155.1 PTPLA 70..229 CDD:282269 68/158 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586360
Domainoid 1 1.000 151 1.000 Domainoid score I4322
eggNOG 1 0.900 - - E1_COG5198
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23409
Inparanoid 1 1.050 168 1.000 Inparanoid score I4128
OMA 1 1.010 - - QHG54207
OrthoDB 1 1.010 - - D1458293at2759
OrthoFinder 1 1.000 - - FOG0001899
OrthoInspector 1 1.000 - - otm24908
orthoMCL 1 0.900 - - OOG6_101538
Panther 1 1.100 - - LDO PTHR11035
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R545
SonicParanoid 1 1.000 - - X1253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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