DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hacd1 and Hacd1

DIOPT Version :9

Sequence 1:NP_609534.1 Gene:Hacd1 / 34614 FlyBaseID:FBgn0032394 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_038963.3 Gene:Hacd1 / 30963 MGIID:1353592 Length:248 Species:Mus musculus


Alignment Length:233 Identity:79/233 - (33%)
Similarity:134/233 - (57%) Gaps:4/233 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKAVSKSSKPGASKEPSAVTKLYLFAYNAGQVVGWSYILWQLVNYYILQGPEFRAQVTLWEYTR 66
            :::|..:....|..:....:...:|..||.....||..:...:|.:|:.:|    ....|::..:
Mouse    12 ASEASDEKEAAGKRRRLGLLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKG----THRGLYKSIQ 72

  Fly    67 LAVIIFQNAAFVEILNASFGLVKSNPVVTGFQVFSRMMVVVGVVMATPTGKVSPGLPIALLAWAI 131
            ..:..||..|.:|:::...|:|.::.:|||.||.||:.:|..:..:....:....:.:.|::|.:
Mouse    73 KTLKFFQTFALLEVVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTV 137

  Fly   132 TEIIRYGYYALNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSYARENSVWSVVMPNKW 196
            |||.||.:|..:::..:|||:.:.||..||:|||:||.||||..:.|..|.:::.::||.:|||:
Mouse   138 TEITRYSFYTFSLLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKY 202

  Fly   197 NATFSYFGFLWIVMLGYIPIFPQLYLHMFAQRRKILGG 234
            |.:|.|:.||.|.|..|||:|||||.||..||||:|.|
Mouse   203 NVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLHG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd1NP_609534.1 PTPLA 73..232 CDD:282269 65/158 (41%)
Hacd1NP_038963.3 PTPLA 79..238 CDD:282269 62/158 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841879
Domainoid 1 1.000 153 1.000 Domainoid score I4280
eggNOG 1 0.900 - - E1_COG5198
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I4074
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54207
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001899
OrthoInspector 1 1.000 - - otm43169
orthoMCL 1 0.900 - - OOG6_101538
Panther 1 1.100 - - O PTHR11035
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R545
SonicParanoid 1 1.000 - - X1253
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

Return to query results.
Submit another query.