DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd1 and hacd3

DIOPT Version :10

Sequence 1:NP_609534.1 Gene:Hacd1 / 34614 FlyBaseID:FBgn0032394 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_002938394.2 Gene:hacd3 / 100379797 XenbaseID:XB-GENE-1006398 Length:362 Species:Xenopus tropicalis


Alignment Length:239 Identity:61/239 - (25%)
Similarity:108/239 - (45%) Gaps:29/239 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEPSAVTKL-----------------YLFAYNAGQVVGWSYILWQL-VNYYILQGPEFRAQVTLW 62
            ||...:||:                 |||.||..|.:|:|:|...: |..:||      .|.:.:
 Frog   125 KEEERITKIRTESRKREDPFLYLKRGYLFMYNLVQFLGFSWIFVNMTVRLFIL------GQDSFY 183

  Fly    63 E-YTRLAVIIF--QNAAFVEILNASFGLVKSNPVVTGFQVFSRMMVVVGVVMATPTGKVSPGLPI 124
            : :..:..:::  |..|.:||:|...||||:.......||..|..::..::......:....:..
 Frog   184 DTFNSMGDMMYFCQTLALLEIINPLIGLVKTGVAPALIQVLGRNFILFFILGQLDEMQTKAIVFF 248

  Fly   125 ALLAWAITEIIRYGYYALNIVKVVPHFVVFLRYTTFIVLYPIGVTGELLCFWWAQSYARENSVWS 189
            ....|:..||.||.:|.|..:......:.::|||.:|.|||:|...|......|.....|...:|
 Frog   249 IFYLWSSIEIFRYPFYMLACLDTEWKLLTWIRYTIWIPLYPLGALAEAASIIQAIPIFNETGRFS 313

  Fly   190 VVMPNKWNATFSYFGFLWIVMLGYIPIFPQLYLHMFAQRRKILG 233
            :.:|.::..:||.|..:::|:| ::.:...| .|:..|||:.||
 Frog   314 LRLPLEFTVSFSVFLVVYLVLL-FLGLGINL-RHLLKQRRRRLG 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd1NP_609534.1 PTPLA 73..234 CDD:461286 44/161 (27%)
hacd3XP_002938394.2 p23_hB-ind1_like 10..117 CDD:107222
PTPLA 197..>325 CDD:461286 32/127 (25%)
Blue background indicates that the domain is not in the aligned region.

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