DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment escl and FIE

DIOPT Version :9

Sequence 1:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_188710.1 Gene:FIE / 821622 AraportID:AT3G20740 Length:369 Species:Arabidopsis thaliana


Alignment Length:395 Identity:158/395 - (40%)
Similarity:229/395 - (57%) Gaps:50/395 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SKSPNTRKLNRLCRRIKAPKMVQPLYKYSSHVREDHNHQIFGVQFNPFLDRGQPQVFATVGKDRV 136
            |.:|:.:|..::..||:..|  :|||               .|.|| |||.....||.|.|.:|:
plant    14 SLTPSNKKSYKVTNRIQEGK--KPLY---------------AVVFN-FLDARFFDVFVTAGGNRI 60

  Fly   137 SIYECERSTGQESCEGIRLLQVYADPDTDESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNPVKH 201
            ::|.|   .|..:   |..||.|||.|.:|||||.:|:. .|.|:|.:||.|.:|:||:.:....
plant    61 TLYNC---LGDGA---ISALQSYADEDKEESFYTVSWAC-GVNGNPYVAAGGVKGIIRVIDVNSE 118

  Fly   202 QCSKNYIGHGHAINELKFHPTRPQLLLSGSKDHSLRLWNIQSDVCVAVFGGVEGHRDEVLSVDF- 265
            ...|:.:|||.::||::..|.:|||:::.|||.|:||||:::.:|:.:|.|..|||.||||||| 
plant   119 TIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFH 183

  Fly   266 --DLRGDRIMSSGMDHSLKLWRLDKPDIKE---AIELSSGFSPNKNTGPFPTIKEHFPDFSTRDI 325
              |:.  |..|.|||.::|:|     .:||   .:|.|  |:...:...|||....||.| |..|
plant   184 PSDIY--RFASCGMDTTIKIW-----SMKEFWTYVEKS--FTWTDDPSKFPTKFVQFPVF-TASI 238

  Fly   326 HRNYVDCVQWFGDFVFSKSCENSIVCWKPGKLSESWHEIKPQESATTVLHHFDYKMCEIWFVRFA 390
            |.|||||.:|||||:.|||.:|.|:.|:| :|.|:    .|.|.|:.||..:...||:|||::|:
plant   239 HTNYVDCNRWFGDFILSKSVDNEILLWEP-QLKEN----SPGEGASDVLLRYPVPMCDIWFIKFS 298

  Fly   391 FNAWQKILALGNQLGTTFVWEL-DCNDPNLTKCSQLVHPKSNSTIRQTSFSKDGSILVCVCDDST 454
            .:.....:|:|||.|..:||:| .|....:||.|   |.:|.|.||||:.|.|||.::..|:|.|
plant   299 CDLHLSSVAIGNQEGKVYVWDLKSCPPVLITKLS---HNQSKSVIRQTAMSVDGSTILACCEDGT 360

  Fly   455 VWRWD 459
            :||||
plant   361 IWRWD 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esclNP_001285857.1 WD40 96..459 CDD:225201 149/369 (40%)
WD40 107..352 CDD:295369 104/250 (42%)
WD40 repeat 111..158 CDD:293791 16/46 (35%)
WD40 repeat 169..209 CDD:293791 13/39 (33%)
WD40 repeat 214..251 CDD:293791 15/36 (42%)
WD40 253..>459 CDD:295369 90/212 (42%)
WD40 repeat 261..323 CDD:293791 24/67 (36%)
WD40 repeat 330..378 CDD:293791 22/47 (47%)
WD40 repeat 386..426 CDD:293791 14/40 (35%)
WD40 repeat 434..458 CDD:293791 12/23 (52%)
FIENP_188710.1 WD40 50..365 CDD:421866 141/339 (42%)
WD40 repeat 87..126 CDD:293791 13/39 (33%)
WD40 repeat 131..168 CDD:293791 15/36 (42%)
WD40 repeat 178..219 CDD:293791 18/49 (37%)
WD40 repeat 243..284 CDD:293791 22/45 (49%)
WD40 repeat 292..332 CDD:293791 15/39 (38%)
WD40 repeat 339..364 CDD:293791 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 136 1.000 Domainoid score I1597
eggNOG 1 0.900 - - E1_KOG1034
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2814
Inparanoid 1 1.050 273 1.000 Inparanoid score I905
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm2719
orthoMCL 1 0.900 - - OOG6_102885
Panther 1 1.100 - - LDO PTHR10253
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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