DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment escl and eed

DIOPT Version :9

Sequence 1:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001017325.1 Gene:eed / 550079 XenbaseID:XB-GENE-491480 Length:438 Species:Xenopus tropicalis


Alignment Length:457 Identity:243/457 - (53%)
Similarity:311/457 - (68%) Gaps:41/457 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EPPAEDESTDHSPAEAVLSNNSSSVCNVVEPDDEHEVNSVDREDTASLFSTTTT------TTRSK 73
            |.||:.:.         ||::.:|         ..|::..:.:||.|:.|.|.|      |..:.
 Frog    12 EMPAKKQK---------LSSDENS---------NPELSGDENDDTVSIESGTNTERPDTPTNAAN 58

  Fly    74 SPNTRKLNRLCRRIKAPKMVQPLYKYS----SHVREDHNHQIFGVQFNPFLDRGQPQVFATVGKD 134
            :|..:...:  .:.|:.|.     |||    :.::||||..:||||||.....|.|.||||||.:
 Frog    59 APGRKGWGK--GKWKSKKC-----KYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSN 116

  Fly   135 RVSIYECERSTGQESCEGIRLLQVYADPDTDESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNPV 199
            ||::||| ...|:     |||||.|.|.|.||:||||||:|||.|..|:||.||.||:|||.||:
 Frog   117 RVTLYEC-HPQGE-----IRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI 175

  Fly   200 KHQCSKNYIGHGHAINELKFHPTRPQLLLSGSKDHSLRLWNIQSDVCVAVFGGVEGHRDEVLSVD 264
            ..||.|:|:|||:|||||||||..|.||||.||||:|||||||:|..||:|||||||||||||.|
 Frog   176 TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 240

  Fly   265 FDLRGDRIMSSGMDHSLKLWRLDKPDIKEAIELSSGFSPNKNTGPFPTIKEHFPDFSTRDIHRNY 329
            :||.|::|||.||||||||||::...:|.||..|..::|||...||.:.|.||||||||||||||
 Frog   241 YDLLGEKIMSCGMDHSLKLWRINSLRMKTAIRESYEYNPNKTNRPFVSQKIHFPDFSTRDIHRNY 305

  Fly   330 VDCVQWFGDFVFSKSCENSIVCWKPGKLSESWHEIKPQESATTVLHHFDYKMCEIWFVRFAFNAW 394
            ||||:|.||.:.||||||:||||||||:.:...:||..||..|:|..|||..|:||::||:.:.|
 Frog   306 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFW 370

  Fly   395 QKILALGNQLGTTFVWELDCNDPNLTKCSQLVHPKSNSTIRQTSFSKDGSILVCVCDDSTVWRWD 459
            ||:||||||:|..:||:|:..||:..||:.|.:||..|.|||||||:|.||||.||||:|:||||
 Frog   371 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILVAVCDDATIWRWD 435

  Fly   460 RV 461
            |:
 Frog   436 RL 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esclNP_001285857.1 WD40 96..459 CDD:225201 223/366 (61%)
WD40 107..352 CDD:295369 158/244 (65%)
WD40 repeat 111..158 CDD:293791 24/46 (52%)
WD40 repeat 169..209 CDD:293791 25/39 (64%)
WD40 repeat 214..251 CDD:293791 27/36 (75%)
WD40 253..>459 CDD:295369 126/205 (61%)
WD40 repeat 261..323 CDD:293791 35/61 (57%)
WD40 repeat 330..378 CDD:293791 27/47 (57%)
WD40 repeat 386..426 CDD:293791 19/39 (49%)
WD40 repeat 434..458 CDD:293791 18/23 (78%)
eedNP_001017325.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 15/77 (19%)
WD 1 88..131 24/48 (50%)
WD40 repeat 93..137 CDD:293791 26/49 (53%)
WD 2 139..182 27/42 (64%)
WD40 repeat 145..185 CDD:293791 25/39 (64%)
WD40 147..435 CDD:392136 183/287 (64%)
WD 3 185..225 30/39 (77%)
WD40 repeat 190..227 CDD:293791 27/36 (75%)
WD 4 231..270 26/38 (68%)
WD40 repeat 237..299 CDD:293791 35/61 (57%)
WD 5 301..338 26/36 (72%)
WD40 repeat 306..354 CDD:293791 27/47 (57%)
WD 6 356..396 20/39 (51%)
WD40 repeat 362..402 CDD:293791 19/39 (49%)
WD 7 405..438 24/33 (73%)
WD40 repeat 410..434 CDD:293791 18/23 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 237 1.000 Domainoid score I2273
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2814
Inparanoid 1 1.050 487 1.000 Inparanoid score I1405
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm48428
Panther 1 1.100 - - LDO PTHR10253
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2640
SonicParanoid 1 1.000 - - X4715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.