DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment escl and esc

DIOPT Version :9

Sequence 1:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_477431.1 Gene:esc / 34595 FlyBaseID:FBgn0000588 Length:425 Species:Drosophila melanogaster


Alignment Length:428 Identity:250/428 - (58%)
Similarity:319/428 - (74%) Gaps:12/428 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NSSSVCNVVEPDDEHEVNSVDREDTASLFSTTTTTTRSKSP--NTRKLNRLCRRIKAPKMVQPLY 97
            :|..|.|..||::..|    ...|.::.::|.:||:|||||  :||...|..|..|:....:..|
  Fly     2 SSDKVKNGNEPEESEE----SCGDESASYTTNSTTSRSKSPSSSTRSKRRGRRSTKSKPKSRAAY 62

  Fly    98 KYSSHVREDHNHQIFGVQFNPFLDRGQPQVFATVGKDRVSIYECERSTGQESCEGIRLLQVYADP 162
            ||.:||:|:|...||||.||..|.:.:||||||.|.:||::|||.|.      .|::||..||||
  Fly    63 KYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQ------GGMQLLHCYADP 121

  Fly   163 DTDESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNPVKHQCSKNYIGHGHAINELKFHPTRPQLL 227
            |.||.|||||||||..|..|:|||||||||||:.:..:::...||||||.|||||||||.:.|||
  Fly   122 DPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLL 186

  Fly   228 LSGSKDHSLRLWNIQSDVCVAVFGGVEGHRDEVLSVDFDLRGDRIMSSGMDHSLKLWRLDKPDIK 292
            |||||||::|||||||.||:|:.||||||||||||:||::|||||:|||||||||||.|:.|:..
  Fly   187 LSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCLNTPEFH 251

  Fly   293 EAIELSSGFSPNKNTGPFPTIKEHFPDFSTRDIHRNYVDCVQWFGDFVFSKSCENSIVCWKPGKL 357
            ..||||:.||..|:|.||||:.:||||||||||||||||||||||:||.||||||:|||||||:|
  Fly   252 HKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKPGQL 316

  Fly   358 SESWHEIKPQESATTVLHHFDYKMCEIWFVRFAFNAWQKILALGNQLGTTFVWELDCNDPNLTKC 422
            .:|:.::||.:|:.|::..|:|..||||||||.||.|||::|||||.|..:|||||.:||.....
  Fly   317 HQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWELDPSDPEGAHM 381

  Fly   423 SQLVHPKSNSTIRQTSFSKDGSILVCVCDDSTVWRWDR 460
            :.|.:.:|.:|:||.:||:|.|:||.||||:|||||:|
  Fly   382 TTLHNSRSVATVRQIAFSRDASVLVYVCDDATVWRWNR 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esclNP_001285857.1 WD40 96..459 CDD:225201 228/362 (63%)
WD40 107..352 CDD:295369 164/244 (67%)
WD40 repeat 111..158 CDD:293791 23/46 (50%)
WD40 repeat 169..209 CDD:293791 23/39 (59%)
WD40 repeat 214..251 CDD:293791 28/36 (78%)
WD40 253..>459 CDD:295369 132/205 (64%)
WD40 repeat 261..323 CDD:293791 40/61 (66%)
WD40 repeat 330..378 CDD:293791 29/47 (62%)
WD40 repeat 386..426 CDD:293791 22/39 (56%)
WD40 repeat 434..458 CDD:293791 15/23 (65%)
escNP_477431.1 WD40 <67..425 CDD:225201 227/359 (63%)
WD40 72..418 CDD:295369 222/351 (63%)
WD40 repeat 76..122 CDD:293791 26/51 (51%)
WD40 repeat 128..168 CDD:293791 23/39 (59%)
WD40 repeat 173..210 CDD:293791 28/36 (78%)
WD40 repeat 220..282 CDD:293791 40/61 (66%)
WD40 repeat 289..337 CDD:293791 29/47 (62%)
WD40 repeat 345..386 CDD:293791 23/40 (58%)
WD40 repeat 393..417 CDD:293791 15/23 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438670
Domainoid 1 1.000 136 1.000 Domainoid score I1597
eggNOG 1 0.900 - - E1_KOG1034
Homologene 1 1.000 - - H2814
Inparanoid 1 1.050 273 1.000 Inparanoid score I905
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm25489
orthoMCL 1 0.900 - - OOG6_102885
Panther 1 1.100 - - P PTHR10253
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2640
SonicParanoid 1 1.000 - - X4715
1413.840

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