DRSC/TRiP Functional Genomics Resources

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Protein Alignment escl and mes-6

DIOPT Version :9

Sequence 1:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001370414.1 Gene:mes-6 / 177657 WormBaseID:WBGene00003224 Length:459 Species:Caenorhabditis elegans


Alignment Length:476 Identity:123/476 - (25%)
Similarity:195/476 - (40%) Gaps:113/476 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TTRSKSPNTRKLNRLCRRI-KAPKMVQPLYKYSSHVREDHNHQIFGVQFNPFLDRGQPQVFATVG 132
            |.:.||.|....:|..... |.|      :..::.:.||....|:|..||.:....:.|..||||
 Worm     4 TKKFKSLNLHGFDRSTEDYGKRP------FVLTAKLLEDQKKAIYGCAFNQYAGIDEEQAVATVG 62

  Fly   133 KDRVSIY-------------ECERSTGQESCEGIRLLQVYADPDTDESFYTCAWSYDS------- 177
            ...:.:|             .|...|.:.|           ..:.:||.:|..|.||:       
 Worm    63 GSFLHMYSVPIDINNIELQWSCNFPTDKSS-----------KVEREESLFTVTWCYDTYEAENDR 116

  Fly   178 -----VTGDPVLAAAGYRGVIRIFNPVKHQCSKNYIGHGHAINELKFHPTRPQLLLSGSKDHSLR 237
                 |||       |..|.|.:.:.|..:.|......|..||:::..|....|::..|.|.|:|
 Worm   117 NPFKVVTG-------GTLGHIYVIDYVSRKLSNRLRSVGWEINDIRTCPANSNLIVCASSDQSIR 174

  Fly   238 LWNIQSDVCVAVFGGVEGHRDEVLSVDFDLRGDRIMSSGMDHSLKLWRLDKPDIKEAIE------ 296
            :.:|:::.|:.|.||:|.|...:||||:...||.|:|.|.||.|..|.|....:||.:|      
 Worm   175 IHHIRNEACLIVIGGLECHAGTILSVDWSTDGDFILSCGFDHQLMEWDLSVKQVKEHLERACKAL 239

  Fly   297 ----------------LSSGFS---------PNKNTG----------PFPT--IKEHFPDFSTRD 324
                            :|.|..         |:|...          |.|:  :..:.|...:.|
 Worm   240 HQDKINVLTQSQDIPYVSKGTMRKSAVSRNIPDKEEDQLLELHRELIPRPSCLLPIYTPSSVSTD 304

  Fly   325 IHRNYVDCVQWF--GDFVFSKSC--ENSIVCWK----PGKLSESWH--EIKPQESATTVLHHFDY 379
            :|.:||||:::.  .::..||.|  |.:|..|:    .|::....|  .::| :|.||.....:.
 Worm   305 MHSDYVDCIRFLIGTNYALSKGCGNEKAIHFWRFGPPKGEVENRIHGNVLRP-KSCTTKFRTMNV 368

  Fly   380 KMCEIWFVRFAFNAWQKILALGNQLGTTFVWELDCND---PNLTKCSQLVHPKSNSTIRQTSFSK 441
            .....||::||.:..::.|..|...|:...::|..|:   |..| ||     ..:.|:||.|||.
 Worm   369 PSGSAWFIKFAVDPRRRWLVCGGAGGSVMFFDLRNNEETNPTHT-CS-----VGSRTVRQASFST 427

  Fly   442 DGSILVCVCDDSTVWRWDRVN 462
            .|..||.|.|:..|.|:|||:
 Worm   428 CGRFLVLVTDEGFVCRFDRVS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esclNP_001285857.1 WD40 96..459 CDD:225201 113/443 (26%)
WD40 107..352 CDD:295369 78/316 (25%)
WD40 repeat 111..158 CDD:293791 13/59 (22%)
WD40 repeat 169..209 CDD:293791 12/51 (24%)
WD40 repeat 214..251 CDD:293791 11/36 (31%)
WD40 253..>459 CDD:295369 70/261 (27%)
WD40 repeat 261..323 CDD:293791 24/104 (23%)
WD40 repeat 330..378 CDD:293791 15/57 (26%)
WD40 repeat 386..426 CDD:293791 12/42 (29%)
WD40 repeat 434..458 CDD:293791 11/23 (48%)
mes-6NP_001370414.1 WD40 120..433 CDD:421866 86/326 (26%)
WD40 repeat 152..192 CDD:293791 12/39 (31%)
WD40 repeat 197..233 CDD:293791 16/35 (46%)
WD40 repeat 245..280 CDD:293791 4/34 (12%)
WD40 repeat 310..367 CDD:293791 15/57 (26%)
WD40 repeat 375..415 CDD:293791 12/45 (27%)
WD40 repeat 420..444 CDD:293791 11/23 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156332
Domainoid 1 1.000 61 1.000 Domainoid score I6922
eggNOG 1 0.900 - - E1_KOG1034
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I3239
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm14628
orthoMCL 1 0.900 - - OOG6_102885
Panther 1 1.100 - - LDO PTHR10253
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2640
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.800

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