DRSC/TRiP Functional Genomics Resources

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Protein Alignment escl and lrwd1

DIOPT Version :9

Sequence 1:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster
Sequence 2:XP_031751539.1 Gene:lrwd1 / 100145159 XenbaseID:XB-GENE-959481 Length:726 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
esclNP_001285857.1 WD40 96..459 CDD:225201
WD40 107..352 CDD:295369
WD40 repeat 111..158 CDD:293791
WD40 repeat 169..209 CDD:293791
WD40 repeat 214..251 CDD:293791
WD40 253..>459 CDD:295369
WD40 repeat 261..323 CDD:293791
WD40 repeat 330..378 CDD:293791
WD40 repeat 386..426 CDD:293791
WD40 repeat 434..458 CDD:293791
lrwd1XP_031751539.1 LRR <19..286 CDD:227223
LRR_8 23..81 CDD:404697
leucine-rich repeat 23..48 CDD:275380
leucine-rich repeat 49..70 CDD:275380
leucine-rich repeat 71..92 CDD:275380
leucine-rich repeat 93..118 CDD:275380
WD40 368..724 CDD:421866
WD40 repeat 466..503 CDD:293791
WD40 repeat 513..566 CDD:293791
WD40 repeat 575..612 CDD:293791
WD40 repeat 633..676 CDD:293791
WD40 repeat 681..723 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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